Chionomys nivalis (European snow vole): 130866421
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Entry
130866421 CDS
T11437
Symbol
Lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130866421 (Lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnl04030
]
130866421 (Lgr5)
G protein-coupled receptors [BR:
cnl04030
]
Rhodopsin family
Others
R-spondin
130866421 (Lgr5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_LRWD1
LRRNT
LRR_EndoS
LRR_R13L1-DRL21
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
130866421
NCBI-ProteinID:
XP_057613844
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All DBs
Position
25:complement(25541417..25668921)
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AA seq
908 aa
AA seq
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MDTSRVRSMLLSLPALLQLVAAGSQPRPDTMPRGCPSHCQCDLDGRMLLKVDCSDLGLSE
LPSNLSVFTSYLDLSMNNISQLPPSLLHSLRFLEELRLAGNALTHIPKGAFAGLHSLKVL
MLQNNQLRQVPSEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEVPV
QAFRSLSALQAMTLALNKIHHIPDLAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETL
DLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGIS
AFQHLPELRTLTLNGASQITEFPDLTGTGNLESLTLTGAKISSLPQTVCDQLPNLQVLDL
SYNLLEDLPSLSGCQKLQKIDLRYNEIYEVKGGTFEQLFNLRSLNLAWNKIAIIHPNAFS
TLPSLIKLDLSSNLLTSFPVTGLHGLTHLKLTGNRALRSLIPSANFPELKIIEMPYAYQC
CAFGACENVHKVSNQWSKTGNSSVDDLPKKDAGLLQVPDERDLEDFLLDFEEDLKALHSL
QCSPSPGPFKPCDHLFGSWLIRIGVWTIAVLALSCNALVTSAVFRTTLYISSIKLLIGVI
AVVNMLMGVSSAVLAVVDTFTFGSFAQHGAWWEDGIGCQIVGFLSIFASESSVFLLTLAA
LERSFSVKCSSKFEMKTPLSSLKVIILLCVLLALTIATVPLLGSSKYNASPLCLPLPFGE
PSTTGYMVALVLLNSLCFLIMTIAYTKLYCNLEKGDLENLWDCSMVKHIALLLFTDCVLY
CPVAFLSFSSLLNLTFISPEVIKFILLVIVPLPACLNPLLYIVFNPHFKEDLGSLGKQTH
FWTRSKHPSLLSINSDDVEKRSCDSTQALVAFTHASIAYDLPSDSGSSPAYPVTESCHLS
SVAFVPCL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcccgcgtccgcagcatgctcctgtccttgcccgcgctgctgcagctggta
gccgccggcagccagccgaggccggacacgatgccgcggggttgcccgtcacactgtcag
tgtgacctggatggcaggatgctgctcaaggtggactgctcggacctggggctctcggag
ctgccctccaacctcagcgtcttcacctcgtacctggacctcagtatgaacaacatcagt
cagctgcccccaagtctcctccacagcctccgcttcctagaagagctgcgtctcgctgga
aatgctttgacacacattcccaagggagcattcgcaggccttcacagtcttaaagttctc
atgctgcagaataatcagctgagacaggtcccctcggaagctctgcagaacttgcgaagt
ctccaatccctacgtctggatgccaaccacatcagctacgtgccgcccagctgtttcagc
ggcctgcactccctgaggcacttgtggctcgatgacaacgctctgacggaagtccccgtc
caggctttcagaagtttgtcggcgctacaagccatgaccttggccctgaacaaaatacac
cacataccagacctggcctttggaaacctctccagtctggtggtgctgcatctccataac
aatagaatccactccctgggaaagaagtgctttgatggactccacagcctggagacttta
gacttaaattataataacctcgatgaattccccactgcaatcaagacactctccaacctt
aaagaactaggattccacagcaacaacatcaggtcaatacctgagaaagcattcgtaggc
aacccttctcttatcacaatacatttctatgacaatcccatccaatttgttggaatatct
gcttttcaacatttacctgaactaagaacactgactctgaatggagcctctcaaattact
gaatttcctgacttaaccggaactggcaacctggagagcctgactttaactggagcaaag
atctcatctcttccccagaccgtctgtgatcagttacctaatctccaagtgctagattta
tcttacaacctgcttgaagacttacccagtttgtccggctgccaaaaacttcagaaaatc
gacctgcggtataacgaaatctatgaagttaaaggtggcacttttgagcagctgtttaac
ctccgatctctgaacttggcttggaataaaattgccattattcaccccaatgcattctct
acgttgccgtctctaataaagctggacctctcctccaacctcctgacgtctttccctgta
actgggttacatggtttaactcacttaaaattaacaggaaaccgtgccttacggagcctg
ataccatctgcaaacttcccagagctcaagattattgaaatgccttacgcttaccagtgc
tgtgcgtttggagcatgtgagaatgtccataaagtttctaatcagtggagtaaaactggt
aacagcagtgtggatgaccttcctaagaaagatgccgggctgttgcaagttccagatgag
cgggaccttgaagatttcctccttgacttcgaggaagacctgaaagctcttcattcgctg
cagtgttccccttctccaggtcccttcaagccttgtgaccatctgtttgggagctggctg
atcagaatcggagtgtggaccatagcagtgctggcgctttcctgcaacgccttggtgacg
tcagcagtgttcagaaccactctgtacatctcctccataaaactgttgatcggggtgatt
gccgtggtgaacatgctcatgggggtctccagtgcggtactggctgttgtggacacgttc
acttttggtagttttgcgcaacacggcgcctggtgggaagatggaattggttgccaaatc
gttggcttcttgtccatttttgcttcagaatcgtccgttttcctgctcactctggcagcc
ctggaacgcagtttttctgtcaaatgttcttcaaagtttgaaatgaaaacacccctgtct
agcctaaaggtgatcattttactgtgtgtcctgttggccctgaccatcgccaccgtcccc
ttgctgggtagcagtaagtacaatgcctcaccgctctgcctgcccttgccgttcggggag
cccagcaccacgggctatatggtggctctcgtcttgctcaactccctctgtttcctcata
atgaccattgcctataccaagctctactgcaatttggagaaaggagacctggagaatctc
tgggactgttctatggtgaaacacattgccttgctgctcttcaccgactgtgtcctttac
tgccccgtggctttcttatccttctcctctttgctaaacctcacatttatcagtccagag
gtaattaagtttatccttctagtgatcgtcccgcttcctgcctgtctcaatccccttctc
tacattgtcttcaacccccattttaaggaggatttgggcagcctaggaaagcaaacccat
ttctggacaagatcaaagcacccaagtctgctgtccattaactccgacgatgttgaaaaa
cggtcctgtgactcaacccaagccttggtagcctttacgcatgccagcatagcctatgac
ttgccttccgattctgggtcgtcgccagcttacccagtgacggaaagctgccacctttct
tcagtagcctttgtcccatgcctctag
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