Chionomys nivalis (European snow vole): 130866484
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Entry
130866484 CDS
T11437
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03013
Nucleocytoplasmic transport
cnl05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130866484 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130866484 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130866484 (Nup107)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130866484 (Nup107)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130866484 (Nup107)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130866484 (Nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
130866484
NCBI-ProteinID:
XP_057613945
LinkDB
All DBs
Position
25
Genome browser
AA seq
926 aa
AA seq
DB search
MDRSIFGEMSSPVIREAEVTRTARKQSAQKRVLIQANQDENFGNTTPRSQMIPRTPSSFR
QPFTPPSRSLLKHPDISCILGTDGRSPRHTQSSGFLGNLSMVTNLDDSNWAAAFSSQRSG
FYTNLEPHSVTEDINLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENI
CGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMF
AVAAINASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENT
LHTLKQRQLLSYIGSVRPLVTELDPDAPIRQNMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGSGTELEPVEGNPYRRIWKISCWRMAEDEL
FNKYERAIYASLSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVVTLDETEELP
REYTEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSR
SNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQD
LAVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPS
LDTGTTEEDRVKVDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDS
IAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLISQ
PTFTEKVAFEHKEKKYEMDHSIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEED
PERTHQMALLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSDRHKLYLVFSKEELRK
LLQKLRESSLMLLDQGLDPLGYEAQS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtatcttcggggagatgtcgtcccctgtgatccgggaggcagaagtgaca
cggactgcaaggaagcaaagtgctcaaaaaagagtcttaattcaggctaaccaagatgaa
aactttggtaacactacaccaagaagccaaatgattcctcgaactccaagctcatttcga
cagccttttactccaccaagccgaagcttactaaaacacccggatatttcctgcattctt
ggaacagacgggaggtcgccccggcacacacagtcttctgggttcttgggaaatctgtcc
atggtaactaatctggatgacagtaactgggcagcagcattctcatcccagcgttcaggg
ttctacacaaacttggagccccacagtgtaaccgaggatataaacctaagtgccgttatg
ttacgtgaagacgaccctggagaggctgcatccatgagtatgttctctgatttcctgcag
tctttcttgaagcactcttcaaccacagtttttgatcttgtagaagagtatgaaaatatc
tgtggtagtcaggtgaatatactgagtaaaatagtgagccgagcaacccctggactgcag
aagttttcaaagacagccagtatgctctggcttcttcaacaagagatggtcacgtggagg
ctgcttgcctctttgtatagagacagaatacagtcttcattagaagaggaaaatatgttt
gcagttgctgctatcaatgccagcgagaagacagttgtggaagcgctgtttcagagggac
tcactggtccgacagagtcagctcgtggtagattggttagaaagtattgccaaagatgaa
attggagaattttctgataatattgagttttatgcaaaatcagtatattgggagaatacc
ctccacaccttgaaacagcggcagctgctgtcttacataggaagcgtccgtcctcttgtc
actgaactggacccggatgctcccattagacagaacatgccacttgatgatctggataga
gaagatgaagttaggttactcaagtaccttttcactctaatccgtgctggaatgacagaa
gaggcacagcggctctgtaaacgttgtgggcaagcatggcgagctgccacactggaaggc
tggaagctgtatcatgaccctaatgttaatggaagcggaacagaactagaacctgttgaa
gggaatccatacagacggatttggaagattagttgctggagaatggcagaagatgaactt
tttaacaaatatgaaagagcaatttacgcctcactgagcgggaatctcaagcagcttctt
cctgtctgtgacacctgggaggacacagtgtgggcctacttccgggtgatggtggacagc
ctggttgaacaggagattcggacatcagtggtgacgctggatgaaacggaagaactccct
agagagtacacggaagcgaattggaccttagaaaaggtttttgaagaacttcaagccact
gataaaaagagagttctggaagagaatcaagaacattatcatatagttcagaagttcctc
atcctgggagacatcgatggtttgatggatgaattcagcaaatggctttccaagagcaga
agcaatctacccggacacctgctccgatttatgactcaccttattttgtttttccgcacc
ctgggactgcagaccaaagaagaagtttccattgaagttttaaagacatacatacagctt
ttaataagtgagaagcatacaaacctcattgcattttatacctgtcatttgcctcaagac
cttgctgttgcccagtacgcattgtttttggaaggtgttacagagtttgagcagcggcat
cagtgcctggaactggctaaagaagcagatttggatgttgcaacaataacaaaaactgta
gttgagaatattcgaaagaaagataatggtgaatttagtcaccatgacctggctccgtcc
ctagatactggcactactgaggaggaccgtgtaaaggtggacgtgattgactggttagtg
ttcgacccagcgcagagggcagaagcgctgaagcagggcaacgccatcatgaggaagttc
ctagcatcaaaaaaacatgaagctgcaaaagaagtgtttgtgaaaattcctcaggattcc
attgcagaaatctacaatcagtgggaggagcaaggcatggagagcccacttcctgctgag
gacgacaacgctatccgagaacacttgtgtatcagagcctatctggaagcccatgaaacc
ttcaatgagtggtttaagcatatgaattcagctccacaaaaacctacattgatatctcaa
ccaacttttaccgagaaagtggcttttgaacacaaagaaaagaagtacgaaatggatcat
agtatttggaaaggacatttagatgccctaactgctgatgtaaaggagaaaatgtacaac
gtcttgttgtttgttgacggagggtggatggtagatgtcagagaggatgccgaggaagac
cctgagagaacacatcagatggctttgctcagaaagctctgtctgcccatgctgtgcttt
ctgcttcataccatactgcacagcaccggtcagtaccaggagtgtctgcagctggccgac
atggtgtcctcggaccgccacaaactttacctggtattttctaaggaagaactaaggaaa
ctgctgcagaagttaagagaatcctctctgatgcttctagatcaggggcttgacccgctc
ggatatgaagctcagtcataa
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