Chionomys nivalis (European snow vole): 130866930
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Entry
130866930 CDS
T11437
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130866930 (Pms1)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130866930 (Pms1)
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GFIT
Other DBs
NCBI-GeneID:
130866930
NCBI-ProteinID:
XP_057614560
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Position
26:complement(8575391..8648926)
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AA seq
926 aa
AA seq
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MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAVDVPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICSVAEVVVTTRTAADDFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQYYSTAKKCKDELRHVQDLLISYA
VLIPDLRIIFIHNKAVIWHKSRVPDHRTALMSVLGTAVMANFDAVQHHCEESQIYLSGFF
PKLDADHISTSLSSPERSFIFINSRPVHQKEILKLIRRYYNLKCLKESTRSYPIFFLKID
VPSAELDVNLTPDKSQVLLQNKEAVLNALENLMVTCYGPLPSTESCGNNKVAVSTANMAA
RETAETDVPVNKMESPGNNYPNADPSAVHFQNDESRKDTGNYLNQQINVNDHCDGHFRSE
EPHVNKDTGSPFQSVSVDRSSSEAVQSKDSKTNSAGSGEHIQGENGRNRTEERGGGGGEA
FLEKSLAVCADDWSKGNVLNAVGENIEPVRILVPQKSLERKVSDDSYPAPEPKNLSDGPR
SKTSNVIDNRSGQLTAYDLISNRAVKKPMAARALFIQDRRAQFLAENPKTSLEDAAAQIE
ALWETLSEEEKLRYEEKAKKDLERYNNQMQRAIEQEPQASLKDGRKKIRATNAWGLAQKH
KLKASLSNQPKLDELFQSQNEKRKSENIKIAEVPFSMESLKVNFKKQKKVDLEEKDEICL
IHGLKFPDAWLVTSRRDVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGS
HYLEVLHKMSTVDQRCGGSTYLSDPRLTANGFKIRLIPGVSSTENYLEIEGMAKCLPFYG
VMDLKEILNAIIDKNAKEPYECRPRKVTSYLEGEAVRLSRQLPMYLPREDIQELIYRMKH
QFGSETKECVHGRPFFHHLTHLPESS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgcctgcggcgacagttcgcctcctgtccagttcccagataatcacatca
gtggtcagcgttgtgaaagaactcatcgaaaactccttggatgctggagccaccagcatc
gacgtgaaactggagaactacgggtttgataaaatcgaggtccgggacaatggtgagggc
atcaaggctgtggacgtccctgtgatggctgtgaagtactacacctccaagataaacagt
cacgaagacctcgagaacctgacaacctacggtttccgcggtgaagccttggggtcgatt
tgtagtgttgcagaggtggtcgtcacaacaaggacagctgctgatgactttagcacccaa
tatgttttagatggcagtggccacatactttctcagaaaccctcacatcttggtcaaggt
actactgtaactgccctgaagttgttcaagaacctgcctgtaaggaagcagtactactca
actgctaaaaagtgtaaagacgagctcagacatgtacaggacctcctcataagctacgct
gtccttatccctgacctaaggattattttcatacataataaggcagttatttggcataag
agtagagtgccggatcacaggacggctctcatgtcggttctggggactgctgtgatggcc
aactttgacgctgttcagcaccactgtgaagaatcccagatttacctaagtggattcttc
ccaaaacttgatgcagaccacatttccacaagtctttcaagcccggagagaagttttatc
ttcattaacagtcgaccagtacatcagaaagagatactgaagctaatccggcgttattat
aatctgaagtgcctgaaggagtctactcggtcgtatcccattttctttctgaaaattgat
gttccttcagctgaactggatgtaaatctcacaccagataaaagtcaagtattattacag
aataaggaagctgttttaaatgctcttgaaaatctgatggtgacctgttacggaccgcta
cccagtacagagtcttgtggaaataacaaagtagctgtttccacagccaacatggctgct
cgtgagacagcagaaacagatgtgcccgtgaataaaatggagtcaccgggaaataattac
ccaaatgctgacccttcggctgtccacttccaaaatgatgaatctagaaaagacactggt
aattatttaaatcaacagataaatgtaaacgaccactgtgatggtcattttcgcagtgaa
gagcctcatgttaataaggacactggaagtccttttcaaagtgtctccgtggataggtcc
tcctcagaggctgtccagagtaaagacagcaagactaactccgcaggttccggtgaacat
atccaaggagaaaatggcaggaaccggacagaagaacgtggcggaggtgggggagaagcg
ttcctcgaaaaatctctggcagtctgtgccgatgactggagcaagggaaatgtgttgaat
gcggtgggagagaatattgaacctgtgagaattctagtgccacagaaaagtctggagcgt
aaagtgagcgatgatagttacccagcccctgaaccgaagaatctcagtgatggccctcgt
agcaagacatccaatgtaatagataacagatccggacagcttacagcctatgacttaatc
agcaaccgagcagtcaagaagcccatggcagcaagggccctgtttattcaagatcgtcgc
gctcagttcctcgcagaaaatcccaagacttctttggaggatgcagcggcacaaattgaa
gcactgtgggagactctgagtgaagaggaaaaactgaggtatgaagaaaaggctaaaaaa
gacttggaacgatacaataatcaaatgcagagagctattgaacaggagccacaagcatcc
ttaaaagatggcagaaaaaagataagagccaccaatgcatggggcttggcccagaagcac
aagctgaaagcctcactatctaatcagccgaaactcgatgagctctttcagtcccagaat
gagaaaaggaagagtgaaaacattaaaatagcggaggtccccttttctatggagagctta
aaagtgaactttaagaaacaaaagaaagttgacttagaagagaaggatgagatttgcctg
atccacggcctcaagtttcctgatgcctggctggtcacgtcccgaagagatgtcatgtta
ctgaacccatacagagtggaggaagccctgctgtttaaaagacttcttgagaatcataag
ctccccgcagagccactggaaaagccaattatattaacagagagtctttttaatgggtct
cattatttagaggttttacataaaatgtcgacagttgaccagagatgcggcggatcaact
tacctgagtgaccctcgtctgacagcaaatggcttcaagatcaggctgataccaggagtt
tccagtactgaaaactacttggaaatagaaggcatggctaagtgtctcccgttctacgga
gtaatggatttaaaggaaattcttaatgccataatagacaagaacgcaaaggagccttac
gagtgcagaccccggaaagtgacgagttacctggagggggaagcagtccgtctctcaaga
cagctacccatgtacttaccaagagaagacatccaagagcttatctataggatgaagcac
cagtttggaagtgaaactaaagagtgtgttcatggccgcccattttttcaccatttaacc
caccttccagaaagttcatga
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