Chionomys nivalis (European snow vole): 130867401
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Entry
130867401 CDS
T11437
Symbol
Chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnl03021
]
130867401 (Chd1)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130867401 (Chd1)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130867401 (Chd1)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130867401 (Chd1)
SLIK complex
130867401 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
130867401
NCBI-ProteinID:
XP_057615346
LinkDB
All DBs
Position
2:complement(3733817..3806904)
Genome browser
AA seq
1709 aa
AA seq
DB search
MNGHSDEESVRNGSGESSQSEDDSGSASGSGSGSSSGSSSGGSSSQSGSSDSDSGSDSGS
QSESESDTSQENKVQAKPPKVDGAEFWKSNPSILAVQRSAMLKKQPPQPQPPHPASSNSG
SEEDSSSSEDSDGSSSEVKRKKHNDEDWQMSGSGSPSQSGSDSESEDEREKSSCDETESD
YEPKNKVKSRKPQSRSKSKNGKKILGQKKRQIDSSEDEDDEDYDNDKRSSRRQATVNVSY
KEDEDMKTDSDDLLEVCGEDAPQPEEEEFETIERFMDCRFGRRGATGATTTIYAVEADGD
PNAGFEKNKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECS
WEDGALISRKFQTCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RRQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDSSSGTERAGGRLGKVKGPTF
RISGVQVNAKLVIAHEDELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGREDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLCGAGGSKRRKTRTKKNKAMKSIKIKEEIKSDSSPLPSEKSDEDDDKLNESKPESKDR
SKKSVVSDAPVHITASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSE
REQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA
IKKRQESQQNSDQNSNVTPHVVRNPDMERLKETNHDDSSRDSYSSDRHLSQYHDHHKDRH
QGDSYKKSDSRKRPYSSFSNGKDHREWDHYKQDSRYYSDREKHRKLDDHRSREHRSGVEG
GVKDRCHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRFLSDWQMDHRAASTGPRSPLDQ
RSPYGSRSPFEHSTEHKSTPEHTWSSRKT
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaatggcagtggagaatcaagccagtcg
gaagacgattctgggtcagcatcaggctctggatccggctcaagttctggcagcagcagt
ggtggaagcagcagccaatctgggagcagcgactctgattctggttctgactcaggaagt
cagtcagagtctgagtcagatacatcccaagagaacaaagtccaagcaaaaccaccaaaa
gtcgatggagccgagttttggaaatctaaccctagtattctggctgttcagagatcggca
atgcttaagaagcagccgccacagccgcagccgccgcatccagcttcatctaacagtgga
tcagaagaggattcctctagcagcgaagactcggatggctcctccagtgaggtcaagagg
aaaaaacataatgatgaagattggcaaatgtctggctcaggatccccatctcagtctggt
tcagattcagaatctgaagatgagagagagaaaagcagctgtgatgagacagaatctgac
tatgagccaaaaaacaaagtcaaaagcaggaaacctcagagcagatctaagtcaaaaaat
ggaaaaaaaattcttggacaaaaaaagagacagattgattcgtctgaagatgaggatgat
gaggattatgataatgataaacgaagctctcgccgccaagccacggtcaatgtgagctac
aaggaagatgaagacatgaaaacagactctgatgacctgctggaagtctgtggagaggat
gctcctcaacctgaggaggaggagtttgaaacaatagaaaggtttatggattgcagattt
gggaggagaggagctactggtgctactacaaccatttatgctgttgaagcagatggtgac
cccaatgcaggatttgaaaaaaacaaagagccaggagacatacagtatttaattaaatgg
aaaggatggtcacacatccacaacacttgggagacagaagaaaccctcaagcagcagaat
gttagagggatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatgg
ctgaaaaatgcttctccagaagatgtggaatattataattgtcagcaagaacttacagat
gatctacacaaacagtatcagatagtggagcgtataattgctcattccaatcaaaaatca
gcagctggtcttcctgattattattgcaaatggcaggggcttccatactcagagtgcagc
tgggaggatggagctctcatctccagaaagtttcagacgtgcatcgatgaatattttagc
aggaatcagtcaaaaactactccttttaaagattgcaaagtattgaaacaaagaccaaga
tttgtagctctgaagaagcaaccatcctatattggaggacatgagggtttagaattgaga
gactatcagctgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgc
atacttgctgatgaaatgggccttggaaagacaatacagacgatctcattcttgaactat
ttgtttcatgaacaccaattgtacggaccttttctattagttgtaccgctctccactctc
acttcctggcaaagagagattcagacatgggcatctcagatgaatgcggtggtttattta
ggtgacattaacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaa
cgattaaaatttaatatacttttaacaacctatgaaattttattgaaggataaggcattc
cttggtggtctaaattgggcatttataggtgttgatgaagcacatcgattaaaaaacgat
gattccctgctgtataaaactttaattgattttaaatctaatcatcgtcttcttatcact
ggaactcctctacaaaactccctgaaagagctctggtcattgctacatttcattatgcca
gaaaagttttcttcatgggaagattttgaagaagaacatggtaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccatttctgttacgccgagttaagaaagatgtg
gaaaaatctcttcctgccaaggttgagcaaatcttaaggatggaaatgagtgctttacag
aaacaatattacaaatggattttaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccgccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattaattcttctagacaagctgttaattcgcctaagagaa
agaggcaaccgagtgctcattttttctcagatggtgcggatgttagatatacttgcagaa
tatttgaagtatcgtcaattcccctttcaaagattagatggatcaataaaaggggagctg
aggagacaagctctagaccatttcaacgccgacgggtcagaggatttctgctttttgctt
tctacaagagctggggggttaggtattaacctagcctctgctgacactgttgttatattt
gattctgattggaatccgcaaaatgatcttcaggctcaagcaagagctcatcgaattggg
cagaagaagcaggtgaatatatatcgtttagtaacaaagggatcagttgaagaagatatt
cttgaaagggccaaaaagaaaatggttttagatcatcttgtgattcaaagaatggacacg
accgggaagacggtgctgcacacaggttctgccccgtcaagttctaccccctttaataaa
gaggagttatctgcaattttaaagtttggtgctgaggagctttttaaggagcctgaagga
gaagagcaagagccccaggaaatggatatagatgaaatcttgaagagagctgaaacgcat
gaaaacgagccaggtcccctgactgtaggggatgagctcctttcccagttcaaggttgcc
aacttttcaaatatggatgaagatgacattgaattggaacctgagagaaattcaaagaac
tgggaggaaatcattccagaagatcaaagaagacgattagaagaggaagaaagacagaag
gaacttgaagaaatttatatgcttccaagaatgagaaactgtgcaaagcagataagtttc
aatggaagtgaagggaggcggagcagaagcaggcggtactctggctctgacagtgactcc
atctcggaaaggaaacgaccaaagaagcgcgggcggccacgcaccatccctcgggagaac
attaaaggatttagtgatgcggaaattaggcggtttatcaagagctataagaaatttggt
ggccctctggaaagattagatgcgattgctcgagatgctgaactggtcgacaagtcagaa
acagatctcagaagactgggagagctggtgcacaatggctgtgtcaaggctctgaaggac
agttcttcagggacagagcgagcaggtggcagacttggaaaagtgaaggggccaacattc
cgaatatcaggagtacaagtgaatgcgaagctggtcattgctcatgaagacgagctgata
cctttgcataaatccattccttcagacccagaggagaggaagcagtacacaatcccgtgc
catacaaaggcagctcactttgatatagactggggcagagaagatgattccaatttgtta
attggtatctatgagtatggctatgggagctgggaaatgattaaaatggatcctgacctc
agtttaacacacaagattcttccagatgatccggataaaaaaccacaagctaaacagtta
cagacacgtgcagactacctcatcaagttgctcagccgagaccttgcaaagaaagaagca
cagagactttgtggtgcaggaggttcaaagaggagaaaaacaagaactaaaaagaataaa
gcaatgaagtccataaaaatcaaagaagaaataaagagtgactcgtctcccctgccatca
gagaagtctgacgaagatgacgataaattgaatgaatctaagcctgaaagtaaagaccgg
tctaaaaagtctgtggtgtcagacgctccggttcatatcactgcaagtggagagccagtt
cccatagctgaggagtctgaagagctggaccagaagacattcagcatctgtaaagaaaga
atgaggccagtaaaagccgctttgaaacagcttgacaggcctgagaaaggcctttcagaa
agagagcaactggaacacactagacagtgtttaatcaagatcggagaccacatcacggaa
tgtctgaaggagtactccaatcctgagcagatcaagcagtggagaaaaaacctgtggatt
tttgtatctaagtttactgagtttgatgcaagaaaattgcataaactgtataagcatgct
attaaaaaacgacaagaatctcagcaaaacagtgaccagaacagcaacgttactcctcat
gtggttagaaatccagacatggaaaggttaaaagagacgaatcatgatgatagcagcagg
gacagttattcttctgatagacacttatctcagtaccatgatcatcataaagaccgccac
cagggagattcttataagaagagtgattccaggaaaagaccctactcttcatttagcaat
ggcaaagaccatcgggaatgggaccactacaagcaagacagcaggtactatagtgacaga
gagaaacacagaaaattggatgaccacaggagtcgcgagcacaggtcaggtgtggaagga
ggtgtgaaggacaggtgtcattctgaccatcggtctcactcggaccatcgactgcactcg
gaccaccggtcaagttctgaatacacacatcataaatcttccagggattatcggtttctc
tccgattggcaaatggaccaccgagctgccagcaccggccctcggtcacctttagatcag
aggtctccttatggctccaggtctccgtttgaacattcaactgaacacaaaagtacacct
gagcacacctggagtagccggaaaacataa
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integrated database retrieval system
