Chionomys nivalis (European snow vole): 130867478
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Entry
130867478 CDS
T11437
Symbol
Hif3a
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130867478 (Hif3a)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130867478 (Hif3a)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
130867478
NCBI-ProteinID:
XP_057615500
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Position
2:complement(75333671..75366515)
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AA seq
664 aa
AA seq
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MALGLQRMRSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCAAGEWNQVGTGGEPLDACYLKALEGFVMVLTAEGDMVYLSENVSKHLGLS
QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKLEAPTERHFSLRMKSTLTSRGRTLN
LKAATWKVLHCSGHMRAYKPPAQTSPTGSPRSEPPLQCLVLICEAIPHPSSLESPLGRGA
FLSRHSLDMKFTYCDERIAEVAGYSPEDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAV
TGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHT
RRPPQRGTSSQKGIPGNSLDPPAPRILAFLHPPALSEASLAADPRRFCSPDLRRLMAPIL
DGHPIAATPSTPQATRRPQSPLPADLPDQLLGGLENAYRLSTARKDKTVEKDLDKAQDSD
TLDLEMLAPYISMDDDFQLNSSEQLPRTHRRPPGVARRPRARSFHGLSPPIPEPSLLPRW
GSDPRLNCSSPSRGDPPTASLMPGTRKRALAQSSEDKGMEQLETKPAKRSPSLEPGSFRL
PPLSLSFLLQGRQFPGNQQDPRTPLLDSHEALGLAPSLLSLYQHEETTQPRNHVPPAAGL
AQAH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggggctgcagcgcatgaggtctagcacggagctgcggaaggagaagtcgcgg
gatgctgcgcgcagccggcgcagccaggagacggaggtgctgtaccagctggcacacacg
ctgcccttcgcgcgcggcgtcagtgcgcatctagacaaggcctccatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcgctgcaggggagtggaaccaggtgggaaca
gggggagagccactggacgcctgctacctgaaggccctcgaggggttcgtcatggtgctc
accgccgagggagacatggtttacctgtcggaaaatgtcagcaagcacctgggcctcagt
cagctggagctcatcggacacagtatctttgatttcattcatccctgtgaccaagaggaa
ctccaggatgccctgacccccaggccaagtctgtccaagaagaagctggaagcccccaca
gagcgccacttttccttgcgcatgaaaagcacacttaccagcagggggcgcacgctcaac
ctcaaagctgccacttggaaggtgctgcactgctcaggacatatgagggcctacaagccc
cctgcgcagacttcccccaccgggagccctcgctccgagcctcccctgcaatgcctggtg
cttatctgtgaagccatcccccacccatccagtctggagtcccctctgggccgaggggcc
tttctcagccgccacagcctggacatgaagttcacatactgcgatgagaggatcgcagaa
gtcgctggctacagccctgaagacctgattggctgttctgcctacgaatacatccatgca
ctggactctgatgcagtcagcaggagcatccacactttgctgagcaagggccaggcagta
acgggtcagtatcgctttctggcccggaccggaggctacctgtggactcagacccaggct
acagtggtgtcagggggacggggcccccagtcagaaagtatcatctgtgtccacttcctg
atcagccgggtagaagagacaggagtggtgctgtccctggaacaaacagagcaacacact
cgcagaccccctcagcggggtacctcctcacagaagggtatccctggcaacagtctagac
ccacctgctccccggattctggccttcctgcaccctccggccctgagtgaggcctccctg
gctgctgaccctcgccgtttctgtagcccagatctgcgtcgccttatggcacccattctg
gatgggcatcccatagccgccacccccagcaccccacaggctacgcgtcgaccccaaagt
cctcttccagctgatcttccagatcagttgcttgggggcttagagaatgcatacagactc
tccactgccaggaaagacaagactgtggagaaagatctagataaagctcaggactctgac
actctggacttggagatgctggctccctacatctccatggatgatgacttccagctcaat
tccagcgagcaattgcccaggacccaccgcagacctcctggggtggcccgcagaccccgt
gctcggagcttccatggtctgtcgccccccatccctgagccctccttgctgccccgctgg
gggagcgatccacgactgaactgctccagcccctccaggggagatccccctacagcctcc
ctaatgcctggaactcggaagagggccctggcccagagctcagaggacaaagggatggag
caactggaaacaaagcccgccaagcggtcccccagcctggaacctggaagcttccgattg
cctcccctcagcctgagttttcttctgcaaggtcgacaattcccagggaaccagcaggat
cccagaacccctctcctggactcccatgaggccttgggactagctccctcgctgctctct
ctctaccagcatgaggaaactacccagcccaggaaccacgtcccaccagcggcaggcttg
gcccaggcccactga
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