Chionomys nivalis (European snow vole): 130867961
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Entry
130867961 CDS
T11437
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130867961 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnl04121
]
130867961 (Mid1)
Enzymes [BR:
cnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130867961 (Mid1)
Ubiquitin system [BR:
cnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130867961 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130867961
NCBI-ProteinID:
XP_057616167
LinkDB
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Position
X:complement(125338839..125701885)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERPFDGNTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
ctcctgctgccctgtgcacatagcctctgcttcaactgtgcccaccgcatcctggtctcc
cactgtgccaccaacgagcctgtggagtccatcagcgccttccagtgccccacctgcagg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctccag
aacatcattgacaggtttcagaaagcctctgtgagcgggcccaattctcccagtgagacc
cgcagggagcggccctttgacggcaacaccatgtcttctgctgagaaggttctctgccag
ttctgtgaccaggatcctgcccaagatgctgtgaagacctgtgtcacttgtgaagtgtcc
tactgcgatgagtgcctgaaagccactcacccgaacaagaagccctttacgggccatcgt
ctgattgagccaatcccggactcacacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagcaatctcaccaatctcattaagaggaacacagaactggagactctt
ctggctaaactcatccaaacctgtcaacatgttgaagtcaatgcatcacgtcaagaagcc
aaattgacagaagaatgtgatcttctcattgaaatcattcagcaaagacgacaaattatt
ggaacgaagattaaagaaggaaaggtgatgaggctccgcaaactagctcagcagattgca
aactgtaaacaatgcattgaaaggtcggcatcactcatatcccaagcggaacactctctg
aaggagaatgaccatgcccggtttctacagacagcaaaaaatatcactgagagagtctcc
atggcaactgcatcatcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttctcgggagaagaaactactagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacagcttcctatgacacgatcacc
gttcattggacttcagatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgttgttagtctgtgcaactcggctgatagctggatgattgtg
cccaacatcaagcagaaccactacactgtgcatggcctccaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagctgaag
acgaacagtcagccgtttaaactggatcccaaatctgctcatcgaaaactgaaggtatcc
catgataacctgacagtggaacgagatgagtcatcatccaaaaagagtcatacgcctgaa
cgcttcaccagccaaggaagttacggcgtggctggaaacgtgttcattgatagtggccga
cattactgggaagtggtcataagtggaagtacatggtatgccattggccttgcatacaaa
tcggcccccaaacatgaatggattgggaagaactctgcttcctgggctctctgccgctgc
aacaataattgggtggttaggcataacagcaaggaaatccccattgagccagccccccac
ctccggcgcgtaggcatcctgctggactatgataatggttccatcgctttttatgatgct
ttgaactccatccacctctatacctttgatgtggcgctttcacagccggtgtgccccact
tttactgtgtggaacaagtgtttgacgattataacgggtcttcccatcccagaccatttg
gactgtacagaacagctaccttga
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