Chionomys nivalis (European snow vole): 130869707
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Entry
130869707 CDS
T11437
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03082
ATP-dependent chromatin remodeling
cnl04714
Thermogenesis
cnl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130869707 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
130869707 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
130869707 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnl03021
]
130869707 (Smarcd3)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130869707 (Smarcd3)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130869707 (Smarcd3)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130869707 (Smarcd3)
PBAF complex
130869707 (Smarcd3)
GBAF(ncBAF) complex
130869707 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
130869707
NCBI-ProteinID:
XP_057618087
LinkDB
All DBs
Position
1:complement(149322135..149354724)
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AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQPQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacctggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
ccacagggccagggccagccagtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccctgagtcccag
gcttacatggacctcctagcattcgagagaaagctggatcaaactatcatgcggaagcga
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacttttaaccctgcgaagcccgatgctgaagattctgatggcagcattgcc
tcctgggagctgcgggtggaggggaagctcttggatgatgtacgtcctggcccaggtctc
tccaggtgtcctgggcccagtaagcagaaacggaagttctcttccttcttcaagagtttg
gtcattgagctggacaaagatctttatggcccagacaaccacctcgtggagtggcatcgg
acacccacaacccaggagacagatgggttccaagtgaagaggccaggggacttgagtgtg
cgctgtaccctactccttatgctggactatcagcctcctcagttcaaactggaccctcgc
ttagcccgactgctggggttgcatacacagagccgctcagccattgtgcaggcactgtgg
caatatgtgaagaccaaccggctgcaggactcccatgacaaggagtacatcaatggagac
aagtacttccagcagatttttgactgtccccgcctgaagttctctgagattccccagcgc
ctcacagccctgctgctgccccctgacccaattgtcatcaaccatgtcatcagcgtggac
ccatcagaccagaagaagacagcatgctatgacattgatgtggaggtagaggagccactg
aaggggcagatgagcagctttctgctgtccacggccaaccagcaggagatcagcgctctg
gacagtaagatccacgagacgattgagtccataaaccagctcaagatccagagggacttc
atgctaagtttctccagagaccccaaaggctacgtccaagatctgctccgctctcagagc
cgagacctcaaggtgatgacagatgtggccggtaaccctgaagaggaacgccgggctgag
ttctaccaccagccctggtcccaggaagccgtcagccgctacttctactgtaagatccag
cagcgcaggcaggagctggaacaatcgctggtcgtgcgcaacacctag
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