Chionomys nivalis (European snow vole): 130869985
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Entry
130869985 CDS
T11437
Symbol
Ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03022
Basal transcription factors
cnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130869985 (Ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
130869985 (Ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnl03021
]
130869985 (Ercc2)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130869985 (Ercc2)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130869985 (Ercc2)
Enzymes [BR:
cnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130869985 (Ercc2)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130869985 (Ercc2)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130869985 (Ercc2)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130869985 (Ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
130869985
NCBI-ProteinID:
XP_057618505
LinkDB
All DBs
Position
2:77594328..77609078
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ
RAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDTHGRQVPLSAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE
TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEETLQRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccgtacgactacatctacccggag
cagttctcctacatgctggagctgaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcaccgggaagacagtatccctgctggcgctgatagtggcttaccag
agggcttttccactggaggtgaccaaacttatctactgctcacggactgtgccagagatt
gagaaggtcatagaagagcttcgcaagctgctcagtttctatgagcagcaggagggggag
aagctgccgttcttaggactggctctgagctcaagaaagaacctgtgcattcatcccgag
gtgacaccactgcgctttgggaaggacgtggatggcaagtgccacagcctcacagcctca
tacgtgcgtgcgcaataccagcaggatgccagcctgcctcactgccgcttctatgaggag
tttgacacccatggacgtcaggtgcccctctctgcgggcatctacaacctggatgacctg
aaggccctagggcagcggcagggctggtgcccctacttcctggctcgatactcgatcctg
catgccaacgtggtggtttacagctaccactacctcctggaccccaagattgcggacctg
gtgtccaaagagctggctcgcaaggccgtagtggtcttcgatgaagcccacaacatcgac
aatgtctgcattgattccatgagtgtcaatctcacccgcagaactctggaccgctgccag
agcaacctagacaccctgcagaagaccgtgctcaggatcaaggagacagatgagcagcgg
ctgcgggacgagtaccggcgcctggtggaggggctgcgggaggccagtgtagcacgggag
acagatgcccacctagccaaccctgtgctgcccgacgaggtgctgaaggaggcagtgcca
ggctccatccgcactgctgagcacttcctgggcttcctgcggaggctgctggagtacgtc
aaatggcggctgcgcgtgcagcatgtggtgcaggagagtccacccgccttcctgagcggc
ctggcccagcgcgtgtgcattcagcgcaagcccctcaggttctgtgctgagcgcctgcgg
tccctgctgcacaccttggagattgctgacctggccgacttctccccgctcacactcctt
gctaactttgccactcttgtcagcacttatgccaagggctttaccattatcatcgagccc
tttgacgacaggacccccaccatcgccaaccccatcctgcacttcagttgtatggacgcc
tccttggccatcaagcctgtgtttgaacgcttccagtctgtcatcatcacctctgggaca
ctgtcccctctggacatctaccccaagatcctggacttccaccctgtcacaatggcaacc
tttaccatgacgctggcccgagtctgcctctgccccatgatcattggccgcggtaatgac
caggtggccatcagctccaaatttgagaccagggaagatattgctgtaatccgcaactat
ggcaacctgctgctggagatgtctgctgtggtccctgacggcattgtggccttctttacc
agctaccaatacatggaaagcactgtggcctcctggtatgagcagggcatccttgagaat
atccagaggaacaagctgctcttcattgagacccaggatggggcggagaccagtgtggcc
ctggagaagtaccaggaggcatgcgagaacggccgtggggccattctgctctcagtggct
cggggcaaagtgtcagaagggattgactttgtgcatcactatgggcgggctgtcatcatg
tttggagtcccctatgtctacacccagagccgaattctcaaggcccgactagagtacctg
cgggaccagttccagatccgcgagaatgactttctcacctttgatgccatgcgccatgca
gcccagtgtgtgggtcgtgccatcaggggcaagacagactatggtctcatggtctttgct
gacaagcggtttgctcgggccgacaagcgtgggaagctgcctcgatggatccaggagcac
ctgactgactccaacctcaacctgacggtggacgagggtgtgcaggtcgccaagtacttc
ctgcggcagatggcacagccctttcacagggaagatcagctgggcctgtcactgctcagt
ctggagcagctgcagtcagaggagacactacagcggatcgagcagatcgcgcagcagctc
tga
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