Chionomys nivalis (European snow vole): 130870133
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Entry
130870133 CDS
T11437
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03015
mRNA surveillance pathway
cnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130870133
09123 Folding, sorting and degradation
03018 RNA degradation
130870133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130870133
03041 Spliceosome [BR:
cnl03041
]
130870133
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130870133
mRNA cycle factors
Stress granule specific factors
130870133
Spliceosome [BR:
cnl03041
]
Complex C
Other components
Complex C specific factors
130870133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_ACIN1
RRM_5
YflT
PABC_AtC3H46
POP1_C
RGP
Motif
Other DBs
NCBI-GeneID:
130870133
NCBI-ProteinID:
XP_057618702
LinkDB
All DBs
Position
2:complement(7810687..7812627)
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AA seq
646 aa
AA seq
DB search
MNPSDPSYSVASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQ
QLEDAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDRSIDSKTLYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQ
AELGARAKEFTNVYIKNLGEDMDDERLQGLFGRFGPALSVKVMTDESGKSKGFGFVSFER
HEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMRQEKPKIEQVPQDRSIR
CQGVNLYVKNLDDGIDDERLRKEFAPFGTITSAKVTMEGGRSKGFGFVCFSSPEEATNAV
TEMNGRIVATKPLYVALAQRKEERQAHLSSQYMQRMAGTSAVSSPVINPFQPAQASLGYF
MTATPQTQKRVAHCAPNQSTKQAPGPCGSAQGARAHPFQSVSSVIHPSAIQSFNTSGPAS
SQALWSMSTHRAANTSTQLMGPHPAAASAAAAPTARPVPQYTYTAGVRNPPQHLSTQPQV
NMQRSAVPVQGKASLTASMLASASPQAQKQMLGEWLFSLIQTMHPALAGKITGMLLEIDN
LELRRMLESPECLHSKVDEAIAVLQAHQARETSQQAVSSVSGVPTA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgaccccagctactccgtggcttccctctatgtgggggacctgcacccc
gatgtgaccgaggcgatgctctatgagaagttcagccccgctgggcccatcctctccatc
cgggtctacagggacaggaccacccgccgctcgctgggctatgcctccgtcaacttccag
cagctggaggacgccgagcgggccctggacaccatgaacttcgatgtgataaagggcaag
ccggtccgcatcatgtggtctcagcgggacccgtcgctgcgcagaagtggggtaggcaac
atattcgtcaaaaacctggacagatccatcgacagcaaaacgctgtatgatacgttttct
gccttcggtaacatcctttcgtgtaaggtggtgtgcgacgagaacggctccaagggttat
ggatttgtgcacttcgagacccaggaagaagccgaacgagcaattgagaagatgaacggg
atgtttctaaacgatcgcaaagtgtttgttgggcgctttaagtctcgtagagacaggcag
gctgaacttggagccagggctaaagagtttaccaatgtttacatcaagaatttgggagaa
gacatggatgatgagagactccagggtctctttggcagatttgggcctgccttaagtgtt
aaagtcatgaccgacgaaagtggaaaatccaaaggattcggattcgtaagctttgaaaga
catgaagatgcccggaaggctgtggatgagatgaacggaaaagacctcaatggaaaacag
atttatgttggtcgagctcagaaaaaagtggaacggcaaactgaactgaagcacaaattc
gggcagatgaggcaagagaagcccaaaatcgaacaggtaccccaagatagaagcatcagg
tgccaaggtgttaacctttatgtgaaaaacctggacgatggtattgatgacgagcgactc
cgaaaggagtttgctccatttggtactatcactagcgcgaaggttaccatggaggggggt
cgcagcaaagggtttgggtttgtatgtttctcctctccggaagaagccactaatgcagtt
acagaaatgaatggtagaattgtggccaccaaaccactctatgtagctttagctcaacgc
aaagaggagcgccaggctcacctcagtagccagtatatgcagagaatggcagggaccagt
gctgtgtccagcccagtcatcaaccctttccagccagcacaggcttctttaggctacttc
atgacagctacaccacagactcagaaacgtgtagcccactgtgctcctaaccaatctact
aagcaggcaccaggtccctgtgggagtgctcagggtgccagagctcatccattccaaagt
gtgtctagtgtcatccacccgtctgctattcagtcatttaatacttcaggaccagcctcc
tcccaggctctgtggagcatgtcaacacatcgtgctgccaacacctccacacagctgatg
ggaccgcatcctgccgctgcttctgctgcagctgctcctactgcccgcccagttcctcag
tatacatataccgctggagtccggaatccccctcagcatcttagtacacaaccgcaagtc
aacatgcagcggtctgctgttcctgtccaaggtaaggcatcgctgactgcctccatgctg
gcgtctgcctctcctcaagcacagaaacaaatgttaggggaatggctgttttctcttatt
caaaccatgcaccctgctctggccggtaaaatcactggcatgctgctggagattgataat
ttagaactgcgccgcatgcttgagtctccagagtgtctccactccaaagttgatgaagcc
attgctgttctgcaagcccaccaagctagagaaacttctcaacaagcagtcagcagtgtc
tctggtgttccaactgcttaa
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