Chionomys nivalis (European snow vole): 130870668
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Entry
130870668 CDS
T11437
Symbol
Rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130870668 (Rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130870668 (Rubcn)
Membrane trafficking [BR:
cnl04131
]
Autophagy
Other autophagy associated proteins
Others
130870668 (Rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130870668
NCBI-ProteinID:
XP_057619367
LinkDB
All DBs
Position
3:61683903..61742859
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AA seq
977 aa
AA seq
DB search
MRPEGARMDLGGGRERLPEESRREHWQLLGNLKTTVEGLVSANCPNVWSKYGGLERLCRD
MQNILYHGLIRDQVFSRQADYWQFVKDIRWLSPHSALHVEKFISLHENDQSSADVSERAV
AELWLQHSLQCHCLSAQLRPLLGDRQYIRKFYTETAFLLSDAHVTAMLQCLEAVEQNNPR
LLAQIDASMFARKHESPLLVTKSQSLTALPGSTYTPPASCAQQSCFGSSSSLHQPMANHS
SERRSTSFSLSGPLWKPQEDRELSPAESQTAQVPLLSDSALAQGSPLTPHEMSSSTLTSP
IEASWVSNQNDSPSDASEGPEYLAIGNPDPRGRTASCQSHSSNAESSSSHLFSSSSSQKP
DSAASSLGDQEAGRQSQPGSVLRRSSFSEGQTVPVANGTKKSHIRSHSDTNIASKGTTGG
PRNITIIVEDPIAESGQYLCSGEGMFRRPSEGQSLISYLSEQDFGSCADLEKENAHFSIS
ESLIAAIELMKCNMMSQCLEEEEVEEEDSDREIQELKQKIRLRRQQIRTKNLLPAYQENE
HGSFRVTSSSSQFSSRDSTQFSDSGSADDVDEFEIQDGSEGSNLTHMSQSGLSVSMASMF
SDADIRRSAVSNGKSSISQNFSHCFLHSTSAEAVAMGLLKQFEGMQLPAASELEWLVPEH
DAPQKLLPIPDSLPISPDDGQHADIYKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKIAVA
KQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQMVVPSRILRKWDFSKYYISN
FSKDLLIKIWNDPLFNVQDINSALYRKVKLLNQVRLLRVQLYHMKNMFKTCRLAKELLDS
FDVVPGHLTEDLHLYSLNDLSATKKGELGPRLAELTRAGAAHVERCMLCQAKGFICEFCQ
NEDDVIFPFELQKCRTCEECKACYHKACFKSGSCPRCERLQARRELLAKQSLESYLSDYE
EEPTEALALEATVLETT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccggagggcgcgcgaatggatcttggcggcggcagggagcgcctgccggaggag
agcaggagagagcattggcagctgctgggtaatttgaagactactgtggagggtttggtg
tcagccaactgccccaatgtctggtccaagtatggtggcctggagcggctttgcagggac
atgcagaacattctatatcatgggctcatccgtgaccaggtgtttagccgccaggcggat
tactggcagtttgtgaaagacattcggtggctcagtccgcactcagcccttcacgttgag
aagttcatcagcttgcatgagaatgaccagagcagcgccgatgtgagcgagcgtgctgtt
gcagagctctggctgcagcacagcttgcagtgccactgcctctcagcccagctccggcct
ctgcttggggacagacagtatatcaggaaattctacacagaaactgctttcctactaagt
gacgcccacgtcacagccatgctccagtgcctggaagcagtggaacagaacaacccccgg
ctcctggcccagattgatgcatctatgtttgccagaaagcacgagagcccgctgctggtt
acaaagagccagagtctgacggctctgcctggttccacgtatacccctccagctagctgt
gctcagcaatcctgctttgggtcctcctctagcctccaccaacccatggccaaccacagc
tcagaaagaagatccacttccttttcgctttctggccctctctggaaacctcaagaagac
agagagctctcaccagcggagagtcaaaccgcccaagttccgctgctttcagactcagct
ctagcccagggttccccactgaccccacatgagatgagttccagcactctgaccagcccc
atagaggcatcctgggtcagcaaccaaaatgactccccaagtgatgccagtgaggggcct
gagtacctggccattggcaacccagacccccgtggccggactgccagttgtcagagtcat
agcagcaatgccgagagtagcagctctcacttgttctcctccagcagctctcagaagcca
gattctgctgcttcttctttaggggaccaggaggcaggtaggcagagtcagccaggcagt
gtccttcgcaggtccagcttctcagaggggcagacagtccctgtcgccaacgggacgaag
aagagccatattcgctcccattcggatactaacattgcctccaaaggaaccacaggaggc
cccaggaatatcaccattatagttgaagatcccattgcagagagtggtcagtacctgtgc
tcaggagaaggcatgtttcgaagaccatcagaaggacagtccctcatcagttacctctct
gagcaagactttggcagctgtgcagacctagaaaaggagaatgcccacttcagcatctca
gagtccttgattgcggccatcgagctgatgaaatgcaacatgatgagccagtgcctagaa
gaggaggaggtagaggaggaagatagtgacagggagatccaggaactgaagcagaagatc
cgccttcggcgccagcagatccgcaccaaaaacttgctccccgcgtaccaggagaatgag
catggaagcttccgggtcacatccagcagctcccagttcagttcacgtgattctacacag
ttctcggactctggctctgctgatgatgttgacgagtttgaaatccaagatggtagtgaa
ggctctaacctgactcacatgtcacagagtggactctcagtatcaatggcctcgatgttc
tcagatgctgacatcaggcgtagtgcagtctccaatggcaaatcatccatctcccagaac
ttctcccattgcttcctgcactccacatctgctgaggcagtggccatggggcttctgaag
cagttcgagggcatgcagcttccagctgcctccgagctggagtggctagttccagagcac
gatgccccgcagaagctcctgcccattcccgactcactgcccatctcaccagatgatggg
cagcatgcggacatctacaagctgcgtatccgtgtccgtggcaacctggagtgggctcca
cctcggcctcagatcatctttaatgttcatccagctccgacgaggaagatcgctgtggcc
aagcagaattaccgctgtgcaggctgtggcatccggactgaccccgattatatcaagagg
ctgcggtactgtgagtacttgggcaagtacttctgtcagtgctgccacgagaacgcccag
atggtcgtccccagccggatcctgcgcaagtgggacttcagcaaatactacatcagcaac
ttttccaaggatctgctcatcaagatctggaatgatcctctcttcaatgtgcaggacatc
aatagcgccctctacagaaaggtcaagctgctcaatcaagtccggctgctgcgggttcag
ctgtaccacatgaagaacatgtttaagacctgccggctggccaaagagcttttggattcc
tttgacgtagttcctggccacctgacagaggatctccacctgtactcactgaacgacctg
tctgcgaccaagaagggggaactggggccccggctggctgagctcaccagagcaggagct
gcgcacgtagagagatgtatgctgtgccaagccaaaggcttcatctgtgagttctgccag
aatgaggatgatgtcatctttccttttgagctccagaagtgccggacctgtgaagagtgt
aaagcgtgttaccacaaagcttgcttcaagtctggaagctgcccccggtgtgagcggctg
caggcccggcgggagttgctggccaagcagagcctggagtcctacctgtctgactatgag
gaggaacccacagaagccttggctctagaggccactgtcctggagaccacttga
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