Chionomys nivalis (European snow vole): 130870813
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Entry
130870813 CDS
T11437
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04360
Axon guidance
cnl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130870813 (Robo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130870813 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnl04515
]
130870813 (Robo1)
Cell adhesion molecules [BR:
cnl04515
]
Immunoglobulin superfamily
ROBO family
130870813 (Robo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
130870813
NCBI-ProteinID:
XP_057619668
LinkDB
All DBs
Position
3
Genome browser
AA seq
1652 aa
AA seq
DB search
MKWKHLSLLVMLPLLILSKTHLLLAQLIPDPEDLERGDGNGTPAPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATG
SPVPTILWRKDGVLVSTQDSRIKQLETGMLQIRYAKLGDTGRYTCIASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNTVTLSWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGSSHGE
SEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPR
SVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIP
SLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYN
NQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQ
ANLSNNMNNGGGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQGGMNWADLLPPPPAHPPPHSNSE
EYSLSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQST
ATLTPSPQEELQPMLQDCPEDIGHMAHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVS
DMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEE
DNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHGSQCPRP
TSPVSTDSNMSAAVIQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQ
LEVRPVMVPKLASIEARTDRSSDRKGGGSYKGREALDGRQVPDLRTNPGDPREAQEQQND
GKGRGNKAAKRDLPPAKTHLVQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQ
ANVGRRNMAEMQVLGAYERGDDNNEELEETES
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatctttctcttctggtcatgctaccactcctcattctgtccaaaacg
catctccttctggcccagctcattccagaccccgaggacctagagaggggcgacggcaac
ggaacaccagcccccacctctgacaatgatgacaattcgctgggctatacaggctcccgt
cttcgtcaggaagatttcccacctcgcattgttgaacacccttcagatctgattgtctca
aaaggagaacctgccactttgaactgtaaagccgaaggccgccccaccccaacgatcgaa
tggtacaaaggcggggaaagagtggagaccgacaaagatgaccctcgctcgcaccgaatg
ttgctgccaagtggatctttatttttcttacgtatagtacatggacggaagagcaggcct
gacgaaggggtctacatctgtgtagcaaggaattacctgggagaggctgtgagccacaac
gcatcgctggaggtagctattctacgtgatgacttccgacaaaacccttctgatgtcatg
gtggctgtaggtgagcctgcagtaatggaatgccagcctcctcggggccatccagaaccc
accatctcctggaaaaaggatggctcacccctggatgataaagacgaaagaatcactata
cgaggaggaaaactcatgatcacttatacccgcaagagcgatgctggcaagtacgtctgt
gttggtaccaacatggtaggggaacgtgaaagtgaagttgcagagctgaccgttttagag
agaccgtcgtttgtgaagagacccagtaatttggcagtaactgtggatgacagtgcagaa
tttaaatgtgaggcccgaggagaccccgtgcctacagttcgatggaggaaagatgatgga
gagctgcccaaatccagatatgaaattcgagacgatcatactttgaaaattcggaaggtg
atggctggtgacatgggatcatacacttgtgttgcagaaaatatggttgggaaagctgaa
gcatcagccactctgacagtgcaagagcctccccattttgtcgtgaagcctcgcgaccag
gttgttgccttgggacgaactgtgacttttcagtgtgaagcaactggaaatccccaacca
gctatcttttggaggcgagaggggagtcagaatctgcttttctcgtaccagccaccccag
tcatccagccggttttcagtgtcccagactggagacctcacgattactaatgtgcagcgg
tctgatgtgggttattatatctgtcagactttaaatgttgctggaagcatcatcacaaag
gcttatttggaagttactgatgtgattgcagaccggcctcccccagtcattcgacaaggt
cctgtgaatcagactgtagcagtggatggtactttagtcctcagctgtgtggccacaggc
agtccagtgcccacaattctgtggaggaaggatggagtccttgtttcaacccaagattct
cggatcaaacagctggagaccggcatgctgcagatccgatatgctaagctgggtgacact
ggccggtatacctgcattgcatcaacccccagtggagaggcgacatggagtgcttacatt
gaagtccaggaatttggagttccggttcaacctccaagacccactgaccccaacttaatc
cccagtgccccctcaaagcctgaagttacagatgtcagcaaaaacacagtgactttatcc
tggcagcccaacttgaactcaggagcaaccccaacgtcttatattatagaagccttcagc
catgcatctggtagcagctggcagaccgtagcagaaaatgtgaaaacagaaacatttgcc
atcaaaggactcaaacctaatgcaatataccttttcctggtgagggcagcgaatgcttat
gggattagtgatccaagccaaatatcagacccagtgaaaacacaagatgtcccaccaact
agtcaaggcgtggaccacaagcaggtccagagagaactggggaatgtagtcctgcacctg
cacaaccctaccatcctttcttcctcttcggtggaagtgcactggacagtggatcaacaa
tctcaatatattcaaggatataaaattctctaccggccatctggatccagccatggtgaa
tctgagtggttggtctttgaagttaggaccccaaccaaaaacagtgtagtgatccctgat
ctcaaaaaaggcgtcaactatgagattaaggctcgcccgttttttaatgagtttcaagga
gccgacagtgaaatcaaattcgccaaaaccttagaagaagcacctagtgcccctccccga
agtgtaactgtgtcaaagaacgatggaaatgggactgcaattcttgtcacttggcaacca
cctcctgaagacactcaaaatggaatggttcaagaatataaggtttggtgtctaggtaac
gaaactaggtatcacataaacaagacagttgatgggtctaccttctcagtggtcatcccc
tctctggttcctgggatccggtacagtgtggaggtggcagcaagcactggagcaggtcct
ggggtgaagagtgagcctcagtttatccagttagattctcatggaaaccccgtgtctccc
gaggaccaagtgagcctcgctcagcagatctcagacgtggtgaagcagccagctttcatt
gctggcattggggcagcctgctggattatcctcatggtctttagcatctggctgtacagg
caccgcaagaagagaaacggtctcaccagcacgtacgcgggcatcaggaaagtcccgtct
tttaccttcacaccaacagtaacttatcaaagaggaggcgaagccgtcagcagtggaggg
aggccaggacttctcaacattagtgagcctgccacacagccttggctggcagacacgtgg
cccaacaccggcaacaatcacaatgactgctccatcaactgctgcacagcaggcaatggg
aacagcgacagcaacctgacaacctacagtcgcccagctgattgtatagcaaattataac
aaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtttatggtgat
gtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggac
gggcgttttgtcaatccatcagggcagcctactccctatgccacaacgcagctcatccag
gcaaacctcagcaacaacatgaacaatggcggcggggactccagcgagaaacactggaag
cctccgggtcagcagaaacaggaagtggcgccaattcagtataacatcatggagcaaaac
aagctgaacaaagattatcgggcaaatgacacaatccccccaaccattccgtacaaccag
tcctatgaccagaatacaggaggatcttacaacagctccgatcggggcagtagtacgtct
gggagtcaaggacacaagaaaggggcacgaacaccaaaggcacccaagcagggcggaatg
aactgggcagacttgcttccccctcctccagcgcatcctcccccacatagcaacagtgaa
gaatacagcctgtccgtagatgaaagctatgaccaagaaatgccgtgtcctgtgccacct
gcaaggatgtatttgcagcaggatgaattagaagaggaggaagatgaaagaggccccaca
cctccggtacggggggctgcttcttctccagcggctgtgtcctatagccaccagtccaca
gccactctcaccccttcgccccaggaggaactccagcccatgttacaggattgtccagag
gacattggccacatggcccaccagccagacaggagacggcagcccgtgagtcctcctcca
ccacctcggccaatttccccacctcatacatatggctacatttcgggacccctcgtctca
gatatggatacggatgccccagaagaggaggaagacgaagctgacatggaagttgccaaa
atgcaaactagaaggcttttgttacgtgggcttgagcagaccccagcatccagtgttggg
gaccttgagagctctgtcactgggtccatgatcaatggctggggctcagcctcagaagag
gacaacatttcgagtgggcgctccagtgtcagttcatctgatggctcctttttcactgac
gctgattttgcccaggcagttgctgcagcagcagagtacgctggcctgaaagtcgctcga
cgccaaatgcaggatgctgctggccgccgccatttccacggctctcagtgccctaggccc
acgagccccgtgtctacagacagcaacatgagcgctgctgtcatccagaaagccagaccc
gccaagaaacagaaacaccagccaggacatctgcgcagagaagcctacacagatgatctt
ccaccccctccagtgccaccacctgctataaaatcacccactgtccagtccaaggcacag
ctggaggtacgacctgtaatggtgccaaaactcgcttctatagaagcaagaacagacaga
tcatcagacagaaaaggaggagggagttacaaggggagagaagcactggatggacgacaa
gtccctgacctgcgaacaaatccaggggaccccagagaagcacaggaacagcaaaatgac
gggaaaggacgggggaacaaggctgcaaagcgagaccttcctccagcaaagacacacctc
gtccaagaggatattctaccgtactgtagaccgactttccctacatcaaacaaccccaga
gatcctagttcctcaagctcgatgtcatcacgaggatcgggaagccgacaaagagagcag
gcgaatgtaggtcggaggaacatggcagaaatgcaagtacttggggcgtatgaaagagga
gatgataataatgaagaattagaggaaactgaaagctga
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integrated database retrieval system
