Chionomys nivalis (European snow vole): 130870874
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Entry
130870874 CDS
T11437
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03030
DNA replication
cnl03410
Base excision repair
cnl03420
Nucleotide excision repair
cnl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130870874 (Rfc5)
03410 Base excision repair
130870874 (Rfc5)
03420 Nucleotide excision repair
130870874 (Rfc5)
03430 Mismatch repair
130870874 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnl03032
]
130870874 (Rfc5)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130870874 (Rfc5)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130870874 (Rfc5)
DNA replication proteins [BR:
cnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130870874 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
130870874 (Rfc5)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130870874 (Rfc5)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130870874 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
130870874 (Rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_assoc_2
AAA_16
AAA_lid_RFC1
RuvB_N
DEAD
AAA_14
nSTAND_NTPase5
DUF815
ResIII
AAA_5
ATPase_2
AAA_19
AAA_30
PhoH
TIP49
TniB
AAA_7
DNAX_ATPase_lid
nSTAND3
Thioredoxin_6
bpMoxR
NPHP3_N
ABC_tran
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
130870874
NCBI-ProteinID:
XP_057619792
LinkDB
All DBs
Position
3:complement(116195948..116206695)
Genome browser
AA seq
338 aa
AA seq
DB search
MAVAPPQQRPAEARARNLPWVEKYRPQTLGDLISHQDVLSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVIEQENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHP
LKTDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLL
TKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgcctccgcagcagcggcccgccgaggcccgggcccggaacttgccctgg
gttgaaaagtaccggccacagaccctaggcgatctcatttctcatcaggacgttctgagt
accattcagaagttcatcagtgaagaccgtctgccacacctgcttctctatggccctccg
gggacaggaaagacgtccaccatcctggcctgtgccaagcagctgtacaaagataaggaa
tttggctccatggtcttggagctgaatgcttccgatgaccgaggaatagatatcgttcgg
gggccaatcctcagctttgccagcacaaggacaatcttcaagaaaggatttaagcttgtg
atcctggatgaagctgatgccatgactcaagatgcccagaatgccttgagacgagtgatc
gagaagttcacagagaacaccaggttttgcctcatctgtaactacctgtccaagatcatc
cctgccttgcagtcaaggtgcacaaggttccgatttggccctctgacgcctgaactcatg
gttcctcgcctggagcatgtaatagaacaggagaatgttgatataagtgaagatggaatg
aaggcccttgtcactctgtccagtggggatatgcgaagggctttgaacattctgcagagt
accaatatggcctttgggaaggtgacagaagagactgtctacacctgcaccgggcatccc
cttaaaacagacattgccaacattctggattggatgttaaatcaagacttcaccactgcc
tacagaaacatcatggagctgaagactctgaagggcttggctctgcatgacatcctgacc
gaggttcacctgtttgtgcacagagttgactttccatcttcagttcggatacatttactg
accaagatggcagacattgagtatagactttccgttggcaccaatgagaagatacagctg
agctccctcattgctgcttttcaagtcaccagagacctgatagtctcagaggcctag
DBGET
integrated database retrieval system
