Chionomys nivalis (European snow vole): 130870977
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Entry
130870977 CDS
T11437
Symbol
Pom121c
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03013
Nucleocytoplasmic transport
cnl05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130870977 (Pom121c)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130870977 (Pom121c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130870977 (Pom121c)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130870977 (Pom121c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130870977
NCBI-ProteinID:
XP_057619971
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Position
3:98701889..98719110
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AA seq
1201 aa
AA seq
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MSPAAAAADGVERSRPPLGLREGRGRARGCGGPAGAAALGLALLGLALYLVPAAAALAWL
AVGASAAWWGLSREPRGPRGLSSFVRVSRRHPRPALTASPPPAKSAVNGSLCEPRSPLGG
PDPAELLLMGSYLGKPGPPQPAVAQDPRDRPGRRPPSRSPPPASAAQRVHHVYPALPTPL
LRPSRRLPHRECGSLSSRFVITPRRRYPIQQAQYSLLGALPTVCWNGGHKKAVLSARNSR
MVCSPVTVRIAPPDSKLLRSSMPEQTLNTTLSSPSSNVPDPCAKETVLNALREKKKRTVE
EEDQLPLDGQENKRRRHDSSGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLN
KRSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGISQLWKRSGGPTSSPFSSPASSRS
QTPERPAKKTREEEPCHPSSSSAPLVTDKESPREKVADSATGKQQNSWTSPPTSGSSGQR
KRKVQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLEDKTDDAPTSATE
TPPATNPPFMFTLPAVGPAASPAALPAPSSNPLLESLKKMQDSPAPPSSEPAAAATTAAP
SPPKTPSLLTPVVSPLTEPVASTSSDSKPTATFLGLTPASSATPLTDTKSSGVPQAEQSA
STPASTAPSPTPKPSMLFGMLSPPANSSSLAMPGPASASPMFKPIFMATPKSENDSPLPS
SSSATTTASPTTTLSTTASTTAHTFKPIFDSVEPFTTMPLAAPFSLKQTTATATATATPA
PLFAGLATATSTVASGTTTSASKLVFGFGVTSVASTANNTMTSTSQPLLFGGGPSVTAAS
SAPALPSIFQFGKPPATAASTAGTSFSQPLGSSAQTAASSSSGASGFSGFGSTLTTSTSA
PATTSQPTLTFSNTVTPTFNIPFSSGAKPALPAYPGANPQPTFGATEGATKPALAPSFGS
SFTFGNSVASTPSAAPAPATFGSAAQAAFGGLKATASTFGTPASTQPAFGSTTSVFSFGS
ATTSGFGATTQTTNSGSSSSLFGSSAPSPFTFGGSAASSGSGGFGLSATPGTGSTSGTFS
FGSGQSGTTGTTTSFGGSLSQNTLGTTSQSSPFAFNVGSTPESKPVFGGTSTPTFGQSTP
APGIGTAGSSLSFGASSAPAQGFVGVGAFGSAAPSFSIGAGSKTPGARQRLQARRQHTRK
K
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggcagccgcggctgacggagtcgagcggtcgcggcccccattgggttta
cgggagggtcggggccgcgcccgcggctgcggaggaccggcgggcgccgcggcactcggc
ctagcgctgctcggcctggcgctctacctagtgccagcggcggccgcgttggcctggctg
gccgtgggggcgagcgcggcctggtggggcctgagtcgcgagccccgcggcccacggggc
ctatcgtcgttcgtgcgcgtctcgcgccgccacccgcggcccgcgctcactgcttcgccg
cctccggctaagtcggcggtcaacggcagcctctgtgagccccgcagcccgcttggaggc
cccgaccccgctgagctcttacttatgggcagctacctgggcaagcccggccctccccag
cctgccgtggcgcaggaccctcgggacaggccgggccgccgcccaccctcacgttccccg
ccgcccgcgtcggcggcccagcgagtccaccacgtctatcccgcgctccccaccccgctt
ttacgaccctcccggcggctaccccaccgagagtgtgggtctttatctagtcggttcgtt
ataacaccccgaagacgctatcccattcagcaggcccaatactccttgcttggggcactg
ccaacggtgtgctggaatggtggtcacaagaaggctgtgctgtctgcacggaactcaaga
atggtgtgtagcccagtgaccgtgaggattgcccctccggacagcaagttacttcgttca
tccatgccagagcagacactcaacacaacattgtcttcaccatcaagtaatgtcccggat
ccttgtgcgaaggagaccgtgctgaatgccctcagagaaaagaagaaaaggacagtggag
gaagaagaccagctacccctcgatggccaggaaaacaagagaaggcgccacgatagcagt
gggagtgggcattcagcattcgagccccttgttgccaacggagtccctgctgcatttgtg
cccaagcctggctccctgaagagaagtctggcttcccagagctcagatgaccacttgaac
aaacggtctcgcacctcctctgttagctccctgactagtacatgcacaggaggcatcccc
agctccagccgcaatgccatcaccagctcctacagctccacccgtggtatctctcagctg
tggaagaggagtggtggccccacctcatcccccttttctagcccagcttcctctcgctcc
cagacaccagagaggccagccaagaaaacaagagaggaggagccgtgtcacccttccagt
tcttcagctcccttggtaacagacaaggagtccccaagagaaaaggttgcagattcagcc
actgggaagcagcagaactcttggacttccccacccacatctggcagctctgggcaacgc
aaacgcaaagttcagttgctgccctcccggcgaggggaccagctcaccctgcctccaccc
cctgagcttggctattccatcactgccgaagacctggacatggagaggaaagcttcactg
cagtggtttaacaaggttttggaggacaagacagatgatgcccccacctcggccactgaa
accccacctgccaccaatcctcctttcatgttcaccctgcctgctgtggggcctgccgcc
tcaccagccgccctcccagctcctagctctaacccactgttggagagcttgaagaagatg
caggactctccagccccaccatcctcagaacctgctgcagcagcaactactgcagcccct
tcacctccgaagacacccagcctcctgacccctgttgtctcaccactgacagagccagtg
gccagcacctcctcggactccaaacctacagccaccttcctggggctgactcctgcttca
tctgccacaccactcactgacaccaagtcctctggggtccctcaggctgagcagtctgcc
agcaccccagcctccacggctccctccccgaccccaaagcccagcatgctgttcgggatg
ctgagcccacctgccaactcttcctcccttgccatgcctggcccagcttctgcttcaccc
atgtttaagcccatttttatggccacacctaaaagtgagaatgacagtcccttgccatct
agctcctcagccaccactacagcctcgcccaccaccaccctctccaccacagccagcact
acagctcacactttcaagcctatttttgacagtgtggagccatttacaaccatgcccctg
gcagcccccttctccctgaagcagacaactgctacagccaccgctacagccacaccagcc
cctctcttcgctggcctggctactgccacctccacagtggcctctggcaccacaacttct
gcctcaaagcttgtgtttggctttggagtgacctctgtggccagcactgccaacaatacc
atgacttccacctcccagccacttctgttcgggggaggtccctctgtcactgctgccagt
tctgccccagccctgccttccatcttccagtttggcaagccccctgccacagcagcatct
acagcaggcacctcttttagccagccccttggcagttctgctcagacagcagccagcagt
agcagtggcgctagcggcttcagtggctttggcagcaccctcaccacctccacctcagcc
cctgccaccaccagccagcctacgcttaccttcagcaacaccgtcacccctaccttcaac
attccctttagctctggtgccaagcctgcactcccagcctaccccggagccaacccacag
cccacgtttggagccactgagggggccaccaagccagcacttgccccaagttttggcagc
tctttcacgtttggcaactctgtggcctcaaccccatctgcagccccagcaccggccacc
tttggtagtgctgcacaagcggcttttggcgggttgaaagccacggcctccacctttggc
acccctgccagcacacagccagcttttggtagcaccacatctgtattttcctttggttca
gccaccacttctggctttggtgccaccacacagaccaccaacagtgggagcagcagctct
ttatttggcagctctgctccatccccgttcacatttggtggctcagcagcttcttctggt
agtggaggctttgggcttagtgctactccaggcactggctccacctctggaactttcagc
tttggctctggacagagcgggaccacaggcaccaccacctcctttgggggaagcctgagt
cagaacaccctgggcacaaccagtcagagttcacctttcgccttcaatgtgggcagtacg
cctgaaagcaagcctgtgtttggaggtacatccacacccacctttgggcagagtacccct
gcccctggaataggcaccgctggcagcagcctctcatttggggcctcctcggcacctgcc
caaggctttgttggagtcggagctttcggatcagcggccccttcgttttccattggcgcg
ggatccaagaccccaggggctcgtcagcgacttcaggcccgaaggcagcatacccgcaag
aagtaa
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