Chionomys nivalis (European snow vole): 130871007
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Entry
130871007 CDS
T11437
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03030
DNA replication
cnl03410
Base excision repair
cnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130871007 (Pole)
03410 Base excision repair
130871007 (Pole)
03420 Nucleotide excision repair
130871007 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnl03032
]
130871007 (Pole)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130871007 (Pole)
Enzymes [BR:
cnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130871007 (Pole)
DNA replication proteins [BR:
cnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
130871007 (Pole)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
130871007 (Pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
130871007
NCBI-ProteinID:
XP_057620044
LinkDB
All DBs
Position
3
Genome browser
AA seq
2275 aa
AA seq
DB search
MVLRNSGRRLAEPGADSEGSRDDGSSSSVSALKRLERSQWTDKMDFRFGFERLKEPGERT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYVASRKGCEREVSSFL
SKKFQGKIAELENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DHASDEYTAMLSSFLQGGNVITDEEETSKKITDQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVKFRGNAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAAHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLLPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKSKLTISYPGAMLNIM
VKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGKRQIVMAQT
SENSLSVCTPDIEDLGLTKPYHCAIPVATKRKRVWESQEESQDIALTVPWQEVLGQPPSL
GTTQEEWLVWLRFHKKKWQLQAQQRLARRKKQRLESTDVPRLGAIREGPASGLGNFLRRT
ARSILDLPWQIVQISETNQAGLFRLWAIIGSDLHCIKLSISRVFYVNQRIAKTEEGPSYR
KVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQLG
CVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHYSQGHKALFGV
FIPSQRRASVFVLDTVRSNQMPNLSALYSAEHSLLLEKVGPKLLPPPKHTFEVRAETNLK
TICRAILRFLLAYKEERRGPTLIAVQSNWELCRLASEIPILEEFPLVPVRVTDKISYGVL
DWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHNH
LLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAVNTILQS
HHINDMEGAGSMGISFDVIQQASLEDMVTGNQAASAPASYDETALCSSTFRILKSMVVGW
VKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGSS
VIYANFNRIILCTKKRWIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSNY
GGIKGKVPSSIHCGQQDSQEREEAKDEEEEEEEEEEEEGMEESEVEDLLDNNWNILQFLP
QAASCQSYFLMIVSAYIVAVYHSMKNELRHSAPGSTPVKRKRASQFSQETNGTAGALPGM
ITFSQDYVANELTQSFFTITQKIQKKVTGSRSSTEPSEMFPVLPGSHLLLNNPALEFVKY
VCKVLSLDTNITNQVNKLNRDLLRLIDVGEFSEEAQFRNPCHSYVLPEVICYSCNFCRDL
DLCKDSSFSQDGAILPQWLCSNCQAPYDSSAIETALVEALQRKLMAFTLQDLVCLKCRGM
KETHMPVYCSCAGDFVLTIHTEVFMEQIRIFKNIAKYYNMSYLQETIEWLLQTSP
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaggaacagcggacgtcggctcgctgaacctggcgcggacagcgaaggcagc
cgggatgatggttcctcttcctcagtctcagcacttaagcgtctggaacggagccagtgg
acagataagatggactttaggtttggttttgagaggctgaaagagcctggagaaaggacg
ggatggctcatcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagt
gcggtggattactacttcattcaagatgatggaagcagatttaaggtggccttgccctat
aagccgtatttctacgttgcatccagaaagggttgtgagagagaagtttcatctttccta
tccaagaagttccagggtaaaattgcagagttagagaatgtccccaaagaagatctggac
ttgccaaatcacttggtcggcttgaagcggagttacatcaagctgtccttccacactgta
gaagaccttgtcaaagtgaggaaggagatctcccctgctgtgaagaagaaccgagagcag
gaccatgccagtgatgagtacacagcaatgctctccagttttctgcaaggaggcaatgta
attactgatgaagaggaaacctctaagaagataactgaccaattggacaacatagtggac
atgagggagtatgatgttccctaccacattcgcctctccattgacctcaaaatccatgtg
gctcattggtacaatgtcaaatttcgaggaaatgcttttcccgtggaaattgcacgacga
gatgatcttgttgaacgacctgaccctgtggttttggcatttgacattgagacaaccaaa
ctgcctctcaaatttcctgatgctgagacagaccagattatgatgatttcctatatgatt
gatggccagggctacctcatcactaacagggagattgtttcagaagatattgaagatttt
gagttcacccccaagccagaatacgaagggcccttttgcgtgttcaatgaacctgatgag
gcccatttgatccagagatggttcgagcatgtccaggagaccaaaccgaccattatggtc
acctacaatggggacttttttgactggccatttgtggaggctagagcagcagcccatgga
ctgagcatgtaccaggagataggcttccagaaggatagccagggggaatataaggcacca
caatgcatccacatggactgcctcaggtgggtgaagagggacagctaccttcctgtgggc
agtcataatctcaaggcagctgccaaagccaaacttggctatgatcctgtagagctggac
cctgaggacatgtgtcgtatggccactgagcagcctcagactctggccacttactcagtg
tcagatgctgttgccacttactacctgtacatgaagtatgttcatcccttcatattcgcc
ctgtgcaccattattcccatggaacctgatgaggtgctgcggaaaggctctggaacactg
tgtgaagccttgttgatggtgcaagctttccacgccaacattatcttccccaataagcaa
gagcaggagttcaacaaactgacagatgatggtcatgtgttggatgctgagacctacgtg
ggaggtcatgtggaggcactagagtctggtgtcttccgaagtgatatcccatgccgattt
aggatgaatcctgcagcctttgatttcctgctgcaacgagttgagaaaactatgcgccat
gccattgaagaagaagagaaggtgcctatggagcaagtcaccaactttcaagaggtgtgt
gatcagattaagaccaagctcacctccctgaaagatgtccctaacagaattgaatgccct
cttatctaccatctagatgtgggagccatgtatcctaatataatccttactaaccgcctg
cagccttctgccatagtggatgaggccacctgtgctgcctgtgacttcaataagcctgga
gcaaattgtcagaggaagatggcctggcaatggaggggagaatttatgccagcaagtcgc
agtgaataccatcgaatccagcatcagctggaatcagagaagtttcctcctttgttgcca
gaggggccagcacgggcctttcacgagctctcgcgagaggaacaggctaaatatgagaag
cggaggctggcagattattgccggaaggcctataagaagatccatatgaccaaggtagaa
gaacgtctgacaaccatctgccagcgggaaaactcattttatgtggacacagttcgagcc
ttccgagacaggcgctatgagttcaaagggctgcacaaggtatggaagaagaagctctca
gcagctgtagaggtgggtgatgcatcagaggtgaagcgctgcaagaacatggagatcctt
tatgattcactgcagctggctcacaagtgcattctgaactccttctatggctatgtcatg
cgcaaaggggctcgctggtactccatggagatggctggtatcgtctgcttcacaggagcc
aacatcatcacccaggcaagagagctgattgagcagatcgggaggcccttagaattggac
acagatggaatatggtgtgtcctgcccaatagctttcctgaaaatttcgtcatcaagaca
accaatgtgaagaaatccaaactgactatctcctatcctggtgccatgttgaacattatg
gtcaaggaaggcttcaccaaccaccagtaccaggaactaacagagccttcctcactcact
tatgtcacccgctctgagaacagcatcttttttgaagttgatggaccataccttgctatg
atacttccagcctctaaggaagaaggcaagaaactgaagaagagatatgctgtattcaat
gaagatggttccttggctgaactgaaaggttttgaggtgaagcgccgaggggagttacag
ctgattaaaatattccagtcctcggtatttgaggccttcctcaagggcagcacactagag
gaagtgtatggctctgtggccaaggtggctgactactggctagatgttctctatagcaag
gctgccaacatgcctgattctgaattgtttgagctgatttctgagaaccgttccatgtct
cggaagttagaagattatggggagcagaagtctacatccatcagcacagcaaaacgcctg
gctgagttcttgggagaccagatggtcaaggatgctggactaagctgtcgctatatcatc
tcccgaaagccagaggggtctcctgtcactgagagggccattcctcttgccattttccaa
gcagagcctacagtgaggaaacattttctccggaaatggctaaagagttcatcgcttcaa
gactttgatattcgcacaattctggactgggactactacatagagcggctagggagtgcc
attcagaaaatcatcaccattcctgcagccctccagcaggtgaagaacccagttccacgt
gtcaaacacccagattggctgcataaaaaactgctagaaaagaatgatatctacaagcaa
aagaagatcagtgaactgtttgtccttgaaggaaaaagacagattgttatggcccagact
tcagaaaacagtctgagtgtctgcactccagacatcgaggaccttggactcacaaagcca
taccattgtgcaatcccagttgcaaccaagaggaagcgagtctgggaaagccaagaggaa
tctcaggatattgcactaactgtgccctggcaagaggtcttggggcagcctccctccctc
ggaaccactcaagaagagtggttggtctggctccggttccacaagaaaaagtggcagctg
caggctcaacagcgcctggcccgcagaaagaagcaacgtctagagtcaacagatgtgcca
aggcttggtgctatccgagagggacctgcctcgggtctggggaactttttacgacgaact
gcccgcagcattctggaccttccttggcaaattgtacagatcagtgaaaccaaccaagct
ggtctcttcaggctatgggccatcattggcagtgacttgcactgcatcaagctgagcatc
tctcgagtattctatgtgaaccagcggatagccaaaacagaggaaggaccttcatatcgc
aaggtgaatcgggctcttcctcgttccaacatggtctacaatctctatgagtattcagta
ccagaggacatgtaccaagaacatatcaacgagatcaacactgagttgtcagcacccgac
attgagggcgtatatgaaactcaggtcccattgttattccgggcccttgtacagcttggc
tgtgtgtgtgtagtcaacaaacagctggtaaggcacctttcaggctgggaagctgaaacc
tttgccctcgaacacctagaaatgcgttcattagcccagttcagctacttggaaccaggg
agtatccgccacatctacctgtaccactactcacagggccacaaggcactctttggagtc
tttatcccctctcagcgaagagcatctgtgtttgtgttggatactgtacgcagcaaccaa
atgcccaacctcagtgccctgtactcagcagaacatagcctactgctggagaaggtgggc
cccaagctcctgcctcccccgaaacacacctttgaagttcgtgctgaaaccaacttgaaa
accatctgcagagccatcctacgcttcctgcttgcctacaaggaagagcgccggggaccc
acactcatcgctgttcagtctaactgggagctgtgtagactggccagtgagattcctatc
ttagaggagttcccactagtgcctgtccgagtaactgacaagatcagttatggagttctg
gactggcaacgccatggagcccgccgaatgatccgacactacctcaatttagacacttgc
ctttcacaggccttcgagatgagcaggtatttccacatccctgttgggaacctaccagaa
gacatttccacctttggctccgacctcttttttgcacgccacctccaacgccacaaccac
ctgctttggctgtcccctacctctcgacctgacctgggtgggaaggaagctgatgacaac
cgccttgttatggagtttgatgaccgagccactgtggagatcaataattctggctgctat
tccactgtgtgcgtggagctggacattcaaaatctggccgtcaacaccatcctccaatcc
caccatatcaatgacatggagggagccggcagcatgggcatcagctttgatgtgatccag
caggcctccctagaggacatggtcacagggaatcaagctgccagtgccccagccagctat
gatgagacagccctctgttctagtaccttcagaatcctgaagagcatggttgttggctgg
gtaaaggagatcacacagtaccacaacatctatgctgacaaccaggttatgcacttctac
cgctggctccagtcaccatgctctctgctccatgacccagccttgcaccggacactacac
aatatgatgaagaaactcttcttgcagctcattgctgagttcaaacgactgggatcatca
gttatctatgccaacttcaatcgcatcatcctctgtacaaagaaacgctggatagaggat
gcccttgcctatgtggaatatatcacaaacagcatccattctaaagagatcttccattcc
ctgacaatctctttctctcgatgctgggaatttcttctctggatggatccatccaactat
ggtggaatcaaaggaaaagttccatctagtattcattgtggacagcaagactcccaggaa
agggaggaagccaaggatgaggaagaggaggaggaagaggaggaagaggaggagggtatg
gaggaatctgaggttgaagacctactggacaacaattggaacattctgcagtttttgcca
caggcagcctcttgccagagctacttcctcatgattgtctcagcatacatcgtggctgta
taccatagcatgaagaatgagttgagacacagtgctccaggcagtacccctgtgaagagg
aagagggctagccagttctcccaagagactaatgggacagctggagcccttcctggaatg
atcaccttctctcaagattatgtggcaaatgagctcactcagagcttcttcaccatcact
cagaaaattcagaagaaagtcacaggttctaggagctccactgagccctcagagatgttc
cctgtcctccctggttcacacttgctgctcaataatcctgctctggagttcgtcaaatat
gtgtgcaaggtattgtctctggacacaaacatcacaaatcaggtgaataagctgaaccga
gacctactacgcctgatagacgttggtgaattctctgaggaggcgcagttcaggaatccc
tgccactcctatgtgctccctgaggtgatttgttacagctgtaatttctgccgagacctg
gacctatgcaaagattcctccttctctcaggatggggccatcctgcctcagtggctctgc
tccaattgtcaagccccctacgactcatctgccattgaaacagccttggtggaagccctc
cagaggaaactgatggccttcacccttcaggacctggtatgcctgaagtgccgtggtatg
aaagagacccatatgcctgtgtactgcagctgtgcaggagactttgttcttaccatccac
actgaggtcttcatggaacagattagaattttcaagaacattgccaagtactacaatatg
tcatacctccaggagaccatagaatggctgctccaaacaagtccttaa
DBGET
integrated database retrieval system
