Chionomys nivalis (European snow vole): 130871135
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Entry
130871135 CDS
T11437
Symbol
Tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130871135 (Tfip11)
Spliceosome [BR:
cnl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130871135 (Tfip11)
Other components
Complex C specific factors
130871135 (Tfip11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130871135
NCBI-ProteinID:
XP_057620370
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Position
3:complement(123387069..123399167)
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AA seq
837 aa
AA seq
DB search
MSLSHLYRDGEGHLDDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSD
EERPSFGGKRARDYSAPVNFISAGLKKGAAEEGDSDDSDDDEKPAKQEDFPKDLGPKKLK
TGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIE
AKQRKGKGAVGAYGSERTTQSLQDFPVADSEEEAEEEFQKELSQWRKDPSGSKKKPKYSY
KTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSVPDEGLPLLA
QLPPTAGKEAKVPGFALPELEHNLQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTA
EVLAHEERVISNLSKVLALVEECERRMQPHGTDPLTLDECARIFEMLQDKYYEEYRLADR
ADLAVAIVYPLVKEYFKDWHPLEDGSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRL
MWEVWMPFVRNVVAQWQPRNCDPMVDFLDSWAPIIPVWILDNILDQLIFPKLQKEVDSWN
PLTDTVPIHSWIHPWLPLMQARLEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLT
PGSWEAFMLRNIVPKLGMCLGELVINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVG
AYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETK
AEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtcccacctgtaccgggatggggaaggccacctggacgatgatgatgacgag
cgtgagaactttgagatcacagattgggatctccagaatgagttcaatcccaaccggcag
cgtcactggcagaccaaggaggaggccacctatggggtgtgggctgagcgtgactcggac
gaggagaggcccagctttggaggaaaacgggcccgagactattctgcacccgtcaacttc
atcagcgcggggctcaagaaaggtgcagctgaggaaggggactccgacgactctgatgat
gacgagaagcctgcgaaacaggaggattttccaaaggatttaggaccaaagaagttaaaa
acgggtggcaattttaagcccagccagaaaggctttgctggaggaaccaagtccttcatg
gactttggcagctgggagagacacacgaaggggatcgggcagaagctgctgcagaagatg
ggctatgtccctggacggggcctgggaaagaacgcacaaggtatcatcaaccccattgaa
gccaaacagagaaaaggcaaaggagctgtgggggcctacggctcagagaggaccactcag
tctctgcaggacttccctgtggccgactcagaagaggaggctgaagaggagtttcagaag
gagctgagtcagtggaggaaagaccccagcgggagcaagaagaagccgaagtactcttat
aagactgtggaggagctgaaggccaagggcaggatcagtaagaagctcacagcgcctcag
aaggagctgtctcaggtcaaggttatcgacatgacaggccgggagcagaaggtgtactac
agttacagccagatcagccacaagcacagtgtccccgatgaagggctgccgttgctggcg
cagctgcctcccacagctggcaaagaagccaaggtgccgggctttgcacttcctgaactg
gagcacaacctgcagctgctcattgagcgtacagagcaggagatcatccagagtgaccgt
cagctgcagtatgagcgggacatggtggtcagcctgtcgcatgagcttgagaagaccgcg
gaggtcctagcacatgaggagcgtgtcatctccaacctcagcaaagtgctggccctggtg
gaggagtgtgagcgccgcatgcagcctcatggcaccgaccccctcacgctggatgagtgt
gcccgcatctttgagatgctgcaggacaagtactatgaggagtatcgcctggcggaccgt
gcagaccttgctgtggccatcgtctacccgcttgtgaaggaatacttcaaggactggcac
cccctcgaggatggcagctatggaacccagatcatctccaagtggaagagcctcctggag
aatgatcagcttctgtctcacagcagccaggacctgtcttcagacgccttccacaggctc
atgtgggaggtttggatgccttttgttcggaatgttgttgcccagtggcaacctaggaac
tgtgacccaatggtggacttcctggacagctgggcacccatcatccctgtgtggattctg
gacaatatcctggaccagctcatcttccccaagctgcagaaggaggtggacagctggaat
cctttgacagacaccgttcccatccattcgtggatccatccgtggctgcccctcatgcag
gcccgcctggagcctctctactcccctgtccgcagcaagctgtccagcgcgctgcagaag
tggcatcccagcgatgcctcagccaagctcatcctgcagccctggaaagaggtcctcact
cctgggtcctgggaggccttcatgctcaggaacatcgtgcccaagttgggcatgtgcctg
ggtgagctcgtcatcaacccccaccagcagcatatggacgccttctactgggtgatggac
tgggaagggatgatttcagtctccagcctggtgggactgttggagaagcatttcttcccc
aagtggcttcaggtactgtgctcctggctcagtaacagccccaattatgaggagatcacc
aagtggtacctgggctggaaatccatgttctcagaccaggtgctggcacacccctctgtc
aaggacaagttcaacgaagcacttgacatcatgaacagggctgtgtcctccaatgtgggt
gcctacatgcagccaggtgcacgagagaacattgcctacctcacccatacggagcgcagg
aaggacttccagtacgaggccatgcaggagcgccgtgaggctgagaacatggctcagagg
ggcatcggtgtggctgccagctctgtgcccatgaactttaaggacctcattgagaccaag
gcggaggagcacaacatcgtgttcatgcctgtcatcggcaagcggcacgagggcaagcag
ctctacacctttggtcgcatcgtcatctacatcgaccgtggtgtggtgttcgtacagggc
gagaagacttgggtgcccacctccctgcagagcctcatagacatggccaagtag
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