KEGG   Chionomys nivalis (European snow vole): 130871189
Entry
130871189         CDS       T11437                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl03030  DNA replication
cnl03410  Base excision repair
cnl03420  Nucleotide excision repair
cnl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130871189
   03410 Base excision repair
    130871189
   03420 Nucleotide excision repair
    130871189
   03430 Mismatch repair
    130871189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnl03032]
    130871189
   03036 Chromosome and associated proteins [BR:cnl03036]
    130871189
   03400 DNA repair and recombination proteins [BR:cnl03400]
    130871189
DNA replication proteins [BR:cnl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130871189
  DNA Replication Termination Factors
   ELG1-RFC complex
    130871189
Chromosome and associated proteins [BR:cnl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130871189
DNA repair and recombination proteins [BR:cnl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130871189
  Check point factors
   HRAD17(Rad24)-RFC complex
    130871189
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_lid_RFC1 AAA_22 Sigma54_activ_2 ABC_tran AAA_16 AAA_2 nSTAND6 MyTH4 AAA_11 MTC2_N zf-HC2
Other DBs
NCBI-GeneID: 130871189
NCBI-ProteinID: XP_057620490
LinkDB
Position
3:complement(81283407..81295374)
AA seq 356 aa
MSLWVDKYRPCSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQSITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AIRVPAPSIDDICSVLSTVCKKEGLALPSKLAHRLAEKSCRNLRKALLMCEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEMIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMVF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggtggacaaataccggccgtgctccctcgcccggctggactatcacaag
gaacaggcggcgcagctgcgcaacctggtgcagtgtggtgactttcctcacctcctagta
tatgggccatcaggtgctggaaaaaagacaagaattatgtgtatcctacgagaactttat
ggtgtcggggtagaaaaattgagaattgaacaccaatctatcacaactccatctaaaaaa
aaaattgaaatcagcaccattgccagtaactaccaccttgaagttaatcccagtgatgcg
ggaaacagtgatcgggtcgtaattcaggagatgctgaagacagtggctcagtcacagcag
cttgaaaccagctcacaaagagacttcaaagtggtattattgacagaggtggacaaactc
acaaaggatgctcagcatgccttgcgcagaaccatggagaagtacatgtccacctgcagg
ctgatcttgtgttgcaattccacatctaaggtgatccccccgatccgcagtaggtgcctg
gcaattcgtgtgcctgctcccagcattgatgacatttgcagtgtgttatccactgtctgc
aagaaggagggtctggctcttccttcgaagctggctcacaggctggcagagaagtcctgc
aggaacctcaggaaagccttactgatgtgtgaagcttgcagagtgcagcagtaccctttt
actgaagaccaagaaatccccgagacagactgggaggtgtatttgagggagactgcaaat
gctatcgtcagtcagcagactccacagaggctccttgaagtccgcgggaggctctatgag
cttctcactcactgtattcctcctgagatgataatgaagggcctgctctcagagctctta
cacaactgcgatgggcagctgaaaggggaggtggcacagatggcagcctattatgaacat
cgactgcagctgggcagcaaagccatttatcacttggaggcatttgtggccaagtttatg
gccctttataagaagttcatggaggacggactggaaggcatggttttctga

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