Chionomys nivalis (European snow vole): 130871796
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Entry
130871796 CDS
T11437
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04145
Phagosome
cnl04148
Efferocytosis
cnl04151
PI3K-Akt signaling pathway
cnl04510
Focal adhesion
cnl04512
ECM-receptor interaction
cnl04810
Regulation of actin cytoskeleton
cnl04820
Cytoskeleton in muscle cells
cnl05165
Human papillomavirus infection
cnl05205
Proteoglycans in cancer
cnl05410
Hypertrophic cardiomyopathy
cnl05412
Arrhythmogenic right ventricular cardiomyopathy
cnl05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
130871796 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130871796 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130871796 (Itgb5)
04148 Efferocytosis
130871796 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130871796 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130871796 (Itgb5)
04810 Regulation of actin cytoskeleton
130871796 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
130871796 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
130871796 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
130871796 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
130871796 (Itgb5)
05414 Dilated cardiomyopathy
130871796 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130871796 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnl04515
]
130871796 (Itgb5)
Membrane trafficking [BR:
cnl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130871796 (Itgb5)
Cell adhesion molecules [BR:
cnl04515
]
Integrins
Integrin beta subunits
130871796 (Itgb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130871796
NCBI-ProteinID:
XP_057621387
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Position
3:complement(60631090..60739837)
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AA seq
799 aa
AA seq
DB search
MPRVPATLYACLLGLCALVPHVAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGNPRSV
TSRCDLKANLIRNGCGGEIESPTSSTHVLRSLPLSSKGSSATGSDVIQMTPQEIAVSLRP
GDQTAFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLVFTATCQDGISYPGQRKCEGLKIGD
TASFEVSVEARSCPGRHTAQAFTLRPVGFRDSLQVEVTYNCTCGCSTGQEPNSARCSGNG
TYICGLCECDPSYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISACRAKDGQ
ICSDRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSSKRDCVECLLLHLGKPDNQTCHQQ
CKDEVITWVDAIVKDDQEAVLCFYKTAKDCVMMFSYTELPNGRSNLTVLREPECGSAPNA
MTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
HTVDFTFNKFNKSYNGSVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgcccgcgaccctctacgcctgtctgctcgggctctgcgcgcttgtgccg
cacgtcgcagggctcaacatctgcactagtggaagcgccacctcatgtgaagagtgtctg
ctaattcaccccaaatgtgcctggtgctccaaagagtacttcggcaatccacggtctgtc
acctctcgttgtgacttgaaagcaaacctcatccgaaatggctgtggaggtgagatcgag
agtcccaccagcagcacccatgtccttcggagcctacccctcagcagcaagggctccagt
gccacaggctcggacgtcatccagatgacaccgcaggagattgctgtgagcctccggcca
ggtgatcagactgccttccagcttcaggtgcgccaggtggaggactatcccgtagacctc
tactatctgatggacctgtccctctccatgaaggatgacttggacaacatccggagcctg
ggcaccaagcttgctgaggaaatgaggaagctcactagtaacttccggttgggttttggg
tcttttgttgacaaggacatctctcctttctcctacacggcaccgagataccaaaccaat
ccatgtattggttacaagttattcccaaactgcgtcccctccttcgggttccgccatctg
ctgcctctcacagacagagtggacagtttcaacgaggaagtgaggaagcagagggtgtcc
cggaaccgtgatgcccccgaagggggctttgatgctgtgctgcaggcggctgtctgcaag
gaaaagatcggttggcgcaaagatgctctgcacttgctggtgttcacaacggatgacgtg
ccccacattgcgctggatggaaaactgggcggcttggttcaaccacacgatggccagtgt
cacctgaatgaagccaatgaatacactgcatccaaccagatggactatccatcacttgcc
ttgcttggggagaagctggcagagaacaacatcaacctcatctttgcagtgacgaagaac
cactatatgctctacaagaattttacagcactgatacctggaaccactgtggagattctg
catggcgactccaaaaatattattcaactgataatcaatgcgtacagtagcatccggtct
aaagtggagctgtcagtctgggatcagccggaagacctcaatctcgtcttcactgccacc
tgccaggatggcatatcctaccctggtcagcggaagtgcgagggtctgaagatcggggac
acggcatcctttgaagtttccgtggaggctcggagctgccctggcagacacacagcccaa
gctttcaccctgcggcctgtagggttccgggacagtctgcaggtggaagtcacctacaac
tgcacatgtggctgtagcacaggacaggagcccaacagtgccagatgcagtgggaacgga
acatacatctgtgggctgtgtgaatgtgaccccagttacctgggcaccagatgcgagtgc
caggagggagagaaccagagcgggtaccagaacctgtgccgagaggcggaaggcaagcct
ctgtgcagcggacgcggggaatgcagctgcaaccagtgctcctgcttcgagagtgagttc
gggaggatctacgggcccttctgcgagtgtgacagtttttcctgcgccagaaacaagggc
gtcctgtgctcaggccacggcgagtgtcactgtggagagtgcaagtgccacgcaggttac
atcggggacaattgtaactgctcaacagacatcagcgcatgccgggccaaggatgggcag
atctgcagtgaccgtggccactgcgtctgtgggcagtgccagtgtacagagcccggagcc
tttggggagacatgtgagaagtgcccaacctgcccagatgcttgcagctccaagagagac
tgtgtagagtgcttgctgcttcacttggggaagcctgataaccagacctgtcaccagcag
tgcaaagacgaggtgatcacgtgggtggacgccatcgtcaaagatgaccaggaggctgtg
ctttgcttctacaagactgctaaggactgcgtcatgatgttcagctatacggaactgccc
aatgggaggtccaacctgacggtcctcagggagccagagtgtggaagcgcccccaacgcc
atgaccatcctgctggctgtggttggcagcatccttctgatcgggatagcactcctggcc
atctggaagctgctcgtcaccatccatgaccgccgagagtttgccaagttccagagtgag
cgctccagggcccgctatgaaatggcctcaaacccgctgtacagaaagcccatctccaca
cacaccgtagatttcaccttcaacaagttcaacaaatcgtacaacggctcggtggactga
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