Chionomys nivalis (European snow vole): 130871921
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Entry
130871921 CDS
T11437
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnl01002
]
130871921 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnl04121
]
130871921 (Usp42)
Enzymes [BR:
cnl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130871921 (Usp42)
Peptidases and inhibitors [BR:
cnl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130871921 (Usp42)
Ubiquitin system [BR:
cnl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130871921 (Usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130871921
NCBI-ProteinID:
XP_057621621
LinkDB
All DBs
Position
3:89554670..89576015
Genome browser
AA seq
1332 aa
AA seq
DB search
MTIVDKTEPSDPSPCQNQPGSSEAVSPEDMDTGSASWGAVSSISDVSNHTLSLGPVPGAV
VYSNSSVPDKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGEP
AHPTHSPGQSSPRPGISQRVVNNKQAAPGFIGPQLPSHVMKTTPHLNGTSPVKDTPSSSM
SSPNGNTSVNRASPVNASTSVQNWSVSRPSVVPEHPKKQKITISIHNKLPVRQSQAQLNN
NLHGPSLEAPSKATPSSTITNPSAIQSTSNASMTSVSNKVAKAVSPSEPCSKPMVNGKAK
VSSSVLVPYGAESSEESDEESKGLAQENGVDMMASTPCARPEAKDEDSEASPHEPQESVT
LNGANSAGSDLRENGLAFDSASCQVQPDIHTENLFSKLNGLPGKVTPAPLQSVPEDKVLE
TFKLTNQAKGPSGEESWTTTGESPPKDPVPQLDPIADEKGSLETPEAVTNGSMKTPTTMS
LLEPTINCTKEDSSIVSAISANPAEVPPSGTAPCNTTGTTLGDTPLPELCDPDDLTTNPS
QPPQAVKGEIAENTQDSTLAEAVERLSPAPSVLTGEGCEQKLFLYLSTEGSEEAEDSSRS
SGVSADTIPPPQPDWTTSSCEGAAEQVSGERGDGSKVGPKVEEPSPAKAKVSSLRKVGRG
HYRSRRARSSSGEHGRDCRARTEDHHHKKRRCYSRERPKQERHPVNTYCNGGQHLGHGDR
DSPEHRSLSRYSHHHSRVRNGPEQDWSRYHHSENEHAWVRERFYPDKMRWDKCRYYHDRY
TPYTAREWRPLRSREHERTAQLGRPHKDSYWGRKGWEPQPRGKERPHFHSSREASGLALS
IERHPQEKAMLAVQDSNHSLPDRFHEHESVKSRKRRYETTENDSRLEKKAHKNLEKDALE
EPRAKKHKKSKKKKKSKDKHRDRDARHQQESDFSGAYSDTDLHRHRKKKKKKKRHSRKSE
DFIKDVEMHLPKPLSYEAVGHFRRTEGTFLLADGLPLEDSGSFREKSKHLRMESRPDRCH
LSEYGQGKKTGN
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgaaccttcagacccatcaccctgtcagaaccagcctggc
agttctgaggcggtctcacctgaagacatggacacaggctctgccagctggggtgccgtg
tcttcaataagtgatgtttcaaatcatacactttctttagggccagtgcctggtgctgta
gtttattccaattcatctgtacctgataaatcaaaaccatcacccccaaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggttctgtttccatctgaaaagatttgtctt
aagtggcaacaatctcatcgagttggcgctgggctccagaatctgggcaatacctgtttc
gccaatgctgcattgcagtgtctgacctacacaccacccctcgccaattacatgttatct
catgagcactccaagacatgccacgcagaaggattttgtatgatgtgcataatgcaaaca
cacattacccaggcactcagcaaccctggagacgttatcaagccaatgttcgtcatcaat
gaaatgcgacgtatagctagacacttccgttttggaaaccaagaagatgcccatgaattt
cttcagtacacagttgatgccatgcagaaagcatgtttaaatggcagcaataaattggac
agacacacccaagctaccaccctagtctgccagatatttggaggatacctaagatcgcga
gtcaaatgtttaaattgcaagggtgtttcagatacctttgatccatatctggacataaca
ttggagattaaggctgctcagagtgttaccaaggcattggagcagtttgtgaagccagaa
caactggatggcgaaaactcgtacaaatgcagcaagtgcaaaaaaatggttccagcttca
aagagattcaccatccataggtcctctaatgttctcactatttcactaaagcgctttgcc
aacttcactggcgggaaaattgctaaggatgtaaaatatcctgagtaccttgatattcgg
ccctatatgtctcagcccaacggagagccaattatttatgttttgtatgctgtgctggta
cacactggttttaactgtcatgctggccactacttttgctacataaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatattagatcggtgcttaac
cagcaagcttatgtactcttttatatcaggtcacatgatgtgaaaaatggaggggaacct
gctcatcccacccatagtcctggccagtcctctccccgtccaggaatcagtcagcgggtc
gtcaacaacaagcaggcagcaccagggtttattggaccccagctaccttcccatgtcatg
aagactacaccacacttgaatggcacctcgccagtgaaagacacgccaagtagttcaatg
tcaagccctaacggaaacaccagcgtcaatagggccagtcctgttaatgcctctacttct
gtgcaaaactggtctgtcagcaggccctcagttgttccagagcaccccaagaaacaaaaa
attaccatcagtattcacaacaagttgcctgttcgccagagtcaggcacagctgaataac
aacctccatggcccttcgctggaggcccctagcaaggcaacaccctcctccaccatcact
aacccttctgcaatacagtctacctcgaacgcatccatgacatctgtttccaataaagta
gcaaaagcagtttcccccagtgaaccctgttctaagcccatggtgaacggcaaggctaag
gtgagctccagtgtgctggtcccctatggggctgagtcctcagaagagtctgacgaggag
tcgaagggcctggcccaggagaatggtgtagacatgatggccagcactccctgtgccagg
ccagaagctaaagatgaggacagtgaggcttcccctcatgagccacaagaatccgtcacg
ctaaatggtgctaatagtgcaggcagcgacttgagagagaacggcctagcatttgacagt
gccagctgtcaggtccagcccgacatacacacagaaaacctcttttccaaacttaatggt
cttcctggaaaggtgacgcctgctcctttacagtctgttcctgaagacaaagtccttgag
accttcaagcttaccaaccaggcaaagggcccatcgggtgaagagagttggactacaaca
ggggaaagccccccaaaggaccctgtgccacagctggatcccatcgctgatgagaaaggt
tctctcgagacaccagaggcagttaccaatgggagcatgaagacccctacaaccatgtca
ctcctggagcccaccatcaactgtaccaaagaagactcctctattgtctcagctatctcg
gctaaccctgcggaggttccgccctccggcactgctccttgtaacaccaccggtactacc
ttgggggataccccactgcccgaattgtgtgaccctgatgacttgactaccaacccgagc
cagccaccccaagcagtgaaaggggaaatagctgagaacacgcaggactccactttggct
gaagcagtagagagactgagtccggctccctcagtactcacaggtgagggctgtgagcag
aaactcttcctttacctcagcacagagggctccgaggaggcagaagattcatctagaagc
tcgggggtctctgcagacacaattccccctcctcagcctgactggaccaccagctcttgt
gaaggggctgctgagcaggtttccggggagagaggtgatggaagcaaggtgggacccaaa
gttgaggagccttccccagctaaggcaaaggtgagcagcctccggaaagtgggtcgagga
cattatcgaagccgaagagcgcgctcctccagtggggagcatgggagggactgcagggcc
cggacggaggaccaccaccataagaagcgacgctgctacagtcgagagcggcccaagcag
gagcgccaccccgttaatacgtactgcaatgggggccagcacctgggccatggtgacaga
gacagccctgagcaccgctccttaagcagatacagccaccatcactcacgggttaggaat
ggcccagagcaggactggagccggtaccaccattcggaaaatgagcatgcttgggtcagg
gagagattctacccagacaagatgaggtgggacaaatgcaggtattaccacgacaggtac
accccatacacggcccgagagtggcgacctctgcgtagtcgtgagcatgaacgcacagct
cagcttgggcgtccacacaaagacagctactggggccggaaaggctgggagccacaacct
cgggggaaggaacggccccacttccatagctcacgagaggcctcaggccttgccctgtcc
atcgagaggcatccccaagagaaggccatgctggctgtgcaggacagcaaccacagctta
cctgatcgctttcacgaacacgaaagtgtcaagtcaaggaaacggaggtatgagactaca
gaaaatgatagccgcctagaaaaaaaagcccacaaaaatctggagaaggatgctttagaa
gagccaagggcgaagaagcacaaaaaatctaagaagaaaaagaagtccaaagataaacac
cgggatcgagatgccaggcatcagcaagaatccgatttttcgggagcatactctgatact
gacctccatagacatcggaagaagaagaagaaaaagaaaagacattcgaggaagtcagag
gactttattaaagatgttgagatgcatttaccgaagcccttgagctatgaggctgtcggc
catttccggagaacagagggcaccttcctgctggccgatggcctgcctctggaagacagt
ggctctttccgggagaaatctaagcatttaaggatggaaagtcggcctgacagatgtcat
ctgtcagagtatggccagggtaagaagactgggaattaa
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integrated database retrieval system
