Chionomys nivalis (European snow vole): 130872121
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Entry
130872121 CDS
T11437
Symbol
Chfr
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnl04121
]
130872121 (Chfr)
Enzymes [BR:
cnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130872121 (Chfr)
Ubiquitin system [BR:
cnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130872121 (Chfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
Yop-YscD_cpl
zf-CCHH
zf-rbx1
zf-RING_6
Glyco_hydro_92
Motif
Other DBs
NCBI-GeneID:
130872121
NCBI-ProteinID:
XP_057621920
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All DBs
Position
3:complement(113893575..113930591)
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AA seq
664 aa
AA seq
DB search
MELPVEDEPQLPQEPWGRLLRLGAEEDEPQILLWKREWTIGRRRGCDLSFPSNKLVSGDH
CKLTVDKKSGQVTLEDTSTNGTVINKLQVVKKQTYPLQSGDIIYLVYRKNEPEHNVAYLY
ESLNEKQSLPQESFEANKENMFHVTKDSSGLGQGDDPQVLPLSPMAEKCLEEPQPSTSTS
DLFPLASTSSVEPELTSAGQKHSSSSGLGKAGISPKECSPLVANREPSSLSPVLQDKEAS
FSLLETENNEELEPAKKKTKGDEEIDLNLQLLVADQCGNAQTSCEDVRVASVKPDKMEET
LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA
YLIQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDI
SQPYIVCRQCPEYRKQAVQFLPCPVPDSELGATQAPGGEAPSTSASLPTAAQDYMCPLQG
SHAICTCCFQPMPDRRAEREQDSRVAPQQCAVCLQPFCHLYWGCTRTGCFGCLAPFCELN
LGDKCLDGVLNNNNYESDILKNYLATRGLTWKNMLAESLLALQRGVFLLSDYRITGNTVL
CYCCGLRSFRELTYQYRQSIPASELPVTVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
RFKN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagctaccagtggaagacgagccgcagctaccgcaggagccctgggggaggctcctt
cgtctaggcgcggaggaggacgaaccgcaaatccttctgtggaaacgcgagtggaccatc
ggaaggaggagaggctgtgacctctcttttcccagcaataaactggtctctggagaccac
tgtaaacttacagtggataaaaaatctggtcaggtgacactggaagataccagtaccaat
ggaacagtgatcaacaagctgcaagttgttaagaagcagacttaccctttgcagagtggg
gatatcatctatttggtatacaggaagaatgaaccagaacacaatgtggcatacctctat
gaatctttaaatgaaaaacaaagcttgcctcaagaatcctttgaagccaataaagaaaat
atgttccatgtgaccaaagattcctcaggtctggggcagggtgatgacccccaggttcta
ccattgtcacccatggctgaaaaatgcttagaggaaccacagccatcaacatcgacatca
gacctcttccccttggcctctacctcttctgtggagccagagctgacctctgcagggcaa
aaacactcctctagctctggacttgggaaagcaggcatctccccaaaagaatgtagtcca
cttgttgcaaatcgtgaaccctctagcctttctccagttctccaagacaaagaagcatcc
ttctctttgttggaaactgaaaacaatgaggaattggagcctgccaaaaaaaagacaaaa
ggagatgaagagattgacttgaacctgcagttattggttgcagaccagtgtggaaatgcc
caaacctcatgtgaggatgtcagagttgcctctgtgaagccagacaagatggaggagaca
ctaacatgcatcatctgtcaagatcttctgcatgactgtgtgagtttgcagccttgtatg
cacacattttgtgcggcttgctactctggctggatggagcgttcatctctgtgccctacc
tgccgatgtccagtggagcgcatctgcaaaaaccacatcctgaacaaccttgtggaagcg
taccttatccagcacccagataagagtcgcagtgaagaagatgtgagaagtatggatgca
aggaataaaatcactcaagatatgctgcaacccaaagtcaggaggtctttctctgatgaa
gaggggagttcagaggacctgctagagctatcagatgttgatagtgaatcctcagacatc
agtcagccatatattgtatgccgacagtgtcctgaatacagaaagcaagcagtgcagttt
cttccttgcccagtcccagatagcgagctgggagctacacaggcccctggtggggaagca
ccatcaacctctgccagcttaccaacagcagcccaggattatatgtgccctcttcaagga
agccacgccatttgcacctgctgcttccagcctatgcctgaccgaagagctgaacgtgag
caggattcccgtgttgcccctcagcagtgtgcagtgtgcctgcaacccttctgccatttg
tactggggctgcacccggaccggctgctttggctgcttggcccctttctgtgagctcaac
ctgggggacaagtgcttggatggggtgctgaacaacaacaactatgagtcggacatcctg
aagaattacctggcaaccagaggtctgacttggaaaaatatgttggcagagagtctcctg
gctttacagcggggcgtatttctcttatctgattacagaatcactggaaatactgtgttg
tgttactgctgtggtctgcgcagcttccgagagctgacctaccagtatcggcagagcatt
cctgcttctgagttgccggtgactgtaacatcccgtcctgattgctactggggccggaac
tgtcgtactcaagtgaaggctcaccatgcaatgaaattcaaccacatctgtgaacagaca
aggttcaagaactga
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