Chionomys nivalis (European snow vole): 130872437
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Entry
130872437 CDS
T11437
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04659
Th17 cell differentiation
cnl04710
Circadian rhythm
cnl05017
Spinocerebellar ataxia
cnl05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
130872437 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
130872437 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
130872437 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
130872437 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130872437 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cnl03310
]
130872437 (Rora)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130872437 (Rora)
Nuclear receptors [BR:
cnl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130872437 (Rora)
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GFIT
Other DBs
NCBI-GeneID:
130872437
NCBI-ProteinID:
XP_057622302
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Position
4:67969282..68699477
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AA seq
523 aa
AA seq
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MESAPAAPDPAASEPGSSGSEAAPSSRETPLTQDAGRKSEAPGAGRRQSYASSSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEVENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggctcg
gaggcggcccccagttccagagagaccccgctgacccaggacgcgggccgcaagagcgag
gcgccgggtgcgggtcgcaggcagagctacgcgagctccagccgagggatctcagtaacg
aagaagacacacacatctcaaattgaaattattccatgcaagatctgtggagacaaatcg
tcaggaatccattatggtgtcattacgtgtgaagggtgcaagggctttttcaggagaagt
cagcagagcaatgccacctactcctgccctcgtcagaagaactgtttgatcgatcgaacc
agcagaaaccgctgccagcactgtcgactgcagaaatgccttgccgtggggatgtctcga
gatgctgtcaagtttggccggatgtccaagaagcaaagagacagcttatatgccgaggtg
caaaagcaccggatgcagcagcaacagcgagaccaccagcagcagcctggggaagctgag
cctctgacacccacctacaacatctcggccaatgggctgacagaactgcacgatgacctc
agcacctacatggacgggcacaccccggagggcagcaaggccgactctgccgtcagcagc
ttctacctggatattcagccctccccggaccagtcaggactggacatcaatgggatcaaa
ccagaacccatatgtgactacacaccagcatctggcttctttccctactgctcctttacc
aacggagagacttccccaaccgtatccatggcagaactagaacaccttgcgcagaacata
tccaaatcgcacctggaaacctgccagtacttgcgggaagaactccagcagatcacatgg
cagaccttcctgcaggaggaggttgagaactatcagaacaagcagagagaggtgatgtgg
caattgtgtgccatcaagattacagaagctatccagtatgtggtggagtttgccaaacgc
attgatggatttatggagctgtgtcaaaatgatcaaattgtgcttctaaaagcaggctct
ctggaggtggtgtttatcaggatgtgccgtgcctttgactctcagaacaacaccgtgtac
tttgatgggaagtatgctggccccgatgtcttcaaatccttaggttgtgaagacttcatt
agctttgtgtttgaatttgggaagagtttatgttctatgcacctgactgaagatgaaatc
gcattattttctgcatttgtactgatgtcagcagatcgctcatggctgcaggaaaaagta
aaaatagaaaaactgcaacagaaaattcagctagcccttcaacacgtcctacagaagaac
caccgagaagatggaattctaacgaagctaatatgcaaggtgtctacgttaagagcctta
tgtggacgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcga
ctccattttcctccattatacaaggaattgttcacttcagaatttgagccagcaatgcaa
atcgatgggtaa
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