Chionomys nivalis (European snow vole): 130872479
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Entry
130872479 CDS
T11437
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04270
Vascular smooth muscle contraction
cnl04360
Axon guidance
cnl04611
Platelet activation
cnl04625
C-type lectin receptor signaling pathway
cnl04810
Regulation of actin cytoskeleton
cnl05135
Yersinia infection
cnl05152
Tuberculosis
cnl05163
Human cytomegalovirus infection
cnl05200
Pathways in cancer
cnl05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130872479 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
130872479 (Arhgef12)
04625 C-type lectin receptor signaling pathway
130872479 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
130872479 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
130872479 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130872479 (Arhgef12)
05205 Proteoglycans in cancer
130872479 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
130872479 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
130872479 (Arhgef12)
05152 Tuberculosis
130872479 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130872479 (Arhgef12)
Membrane trafficking [BR:
cnl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130872479 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130872479
NCBI-ProteinID:
XP_057622434
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Position
4:complement(41772059..41905185)
Genome browser
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMASPHSPG
AAGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEEYNRTGTPRLLKEIQ
ETKKHISQLQEQLSKATGSAQDGTVIAPSRPLGDALTVSEAEADPGDGLCRTDGSSGDAS
RPSSDNADSPKNSLKERIYLEETPEKSEGIQDTDTQSLVGSPSTRGAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVPVPEEISLDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVTKIEEVLMTAQPVEEER
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEDKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKLRHPKHLSAPSSVSPEPQDPAKLRQSGLANEGIDTGY
LPASAIPSATSGAALSQEGGKEHDAGSKQVGEAPVPGDCLDSTPRVSNTVFDFPPPLLDQ
VQEEECEVERMAEHGTPKPFRKFDSIAFGESQSEDEQFENDLEMDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLVWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEKEKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKMSEYPNVDELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDDEEPSKLKVEHHGLSVTGLQSPDRVLGLESPLISSKPQSHSLTTP
GKSEAEHLFVTATQFAKEQHANGTLKEDDGSYPIPEPHLPVSEERWALDALRNLGLLKQL
LAQQFGLTEKSTQEDWQSFSRYGSASEEGQAESGIQDSENVKACHAGEGQMPFKTGTGDF
ATCDSPRTSTESCATQDSVILASQDSQASNILVMDHMILTPEMPTAEPEGGLDDSGEHFF
DAREAHSDDNPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEVASSFTLQPV
AGIPSVDSTHQQQYSPQNAHSDGAVSPFTPEVLVQRRWRAMEDACFEIQSPSFCTDSQSQ
ILEYIHKIEADLEHLKKVEESYALLCQRLASSALPDKLSDKS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaatcgagagtcaccaacagataagaaacagaaagttgaacgcagtaca
tcccatgattttgaccccacagatagttcctccaagaagacaaagtctagttcagaggaa
agtagatccgagatctatggccttgttcaacgctgtgtgatcatccagaaagacgacaat
ggatttgggctgacagtcagtggagacaatccagtcttcgtacaatctgtcaaagaagat
ggagcagccatgcgggctggagtacaaacaggtgaccgaatcatcaaggtgaatgggact
ctggtgacgcattcaaaccatctggaggtggtgaaactaatcagatctggttcctatgta
gctctcactgtccagggacgcccacctgggtcgccccagattccacttgctgattctgaa
gtagaaccctcagtcactggacatatgtctcccattatggcatcccctcattcccctgga
gcagctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagagattctgaggaaaatgttgcagaaagaacaggagcggctg
cagttactgcaggaagaatacaaccgaacaggtaccccaagattgctcaaggagatccag
gagaccaagaagcacatttctcagctgcaggagcagctgtccaaagccacaggctctgct
caggacggtactgtaattgcaccctctaggccattaggtgatgccctaacagtcagcgag
gcagaagcagatcctggagatggcctgtgcaggactgatgggagcagtggagatgcttct
cggcctagtagtgacaatgcagatagtcccaagaatagtctgaaagaaagaatttatcta
gaggaaaccccagagaaaagtgaaggaattcaggacactgacacacaatcgctcgtcggc
agtccctccacccgtggagcacctcatattattggagcagaggatgatgactttggtact
gaacatgagcagatcaatgggcagtgcagctgtttccagagcattgaactgctgaaatca
cgccctgctcacttggctgttttcttgcaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataagcagaccaactccaaggagactcggcgt
gtcttccttgagtttcatcagttcttcctggaccgatctgcacatctgaaagttcctgtt
cccgaggaaatctcactggatctagaaaagagaagacccgagcttattcctgaggacctt
catcggcactacattcaaactatgcaggagagagtacaccctgaagttcagaggcattta
gaggatttccgacagaaacgtagcatgggactgaccttggcggagagtgagctgactaag
cttgatgcggagagagacaaggaccgggttactctggagaaggagcgagcatgtgcggaa
cagatcgttaccaaaattgaagaagtattgatgactgctcagcctgtggaagaagaaagg
agttccacaatgcagtatgtgattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaacttggagcacaagcggggtcgaattggattccttccaaagatcaagcaa
agcatgaagaaagatagagagggcgaagacaaagggaagcgaagaggattccccagcatt
ttgggacccccaaggagaccaagccgccatgacaacagtgcaattggcagggccatggag
atacagaaactacgccacccgaaacacttatctgcaccctcatctgtgagtcctgagcct
caggaccctgccaagttgcgccagagtggattagccaatgaaggaatagacactgggtac
ctgcctgccagtgccataccctctgccacttcaggagctgctctttcccaagagggaggg
aaagagcatgatgcaggatcaaaacaagttggagaagcaccggtgcctggagactgcttg
gacagcacacctcgtgtctccaatactgtttttgacttcccacctcctctgttagatcaa
gtgcaggaggaggaatgtgaagtagagaggatggcagaacatggaaccccaaaacccttt
agaaagtttgacagcatcgcctttggagaaagtcagagtgaggatgagcagtttgagaat
gacctggagatggatcctcccaactggcagcagcttgttagtagagaggtgttactggga
ctgaaaccttccgagatcaaaagacaggaagtgattaatgaattgttttacactgaaaga
gctcatgtccgaacattgaaggttcttgaccaagtattctatcagcgtgtgtccagagaa
ggaattctatctccttcagaactacgcaagattttttcaaacttggaagatattcttcaa
cttcatgttgggttgaatgagcaaatgaaagctgtccggaagagaaatgagacctctgtt
attgatcatattggggaagatctgcttgtctggttcagtggaccaggggaagagaagttg
aaacatgctgctgctacattctgcagtaaccagccttttgctctggaaatgatcaagtct
cgtcagaaaaaggattctcgatttcagacttttgtgcaggatgctgagagtaaccctctg
tgtcgtcgccttcagctgaaagatatcattcccacccaaatgcagaggcttaccaagtac
ccacttcttttggataatattgccaaatacacagaatggccaccagaaaaggaaaaggtg
aagaaagctgcagatcattgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgacacctccaatctcaaa
atgtccgagtacccaaatgttgatgagctcaggaatttggatttaacaaaaagaaagatg
attcatgaagggcctttggtttggaaggtgaatcgagataaaagcatcgatctttacaca
ctgctactggaagacattcttgtactgttgcaaaaacaggatgacaaactggtgttacgg
tgccatagtaagatactggcgtccacagctgacagcaagcacacgttcagtcccgtcatt
aagctgagcacagtgttggttcgacaggtggcaacagataacaaagctttatttgtcatc
tccatgtcagataacggagcccaaatttatgaattggtagcacagacagtttctgaaaag
acggtctggcaggacctcatctgtcgaatggctgcttcagtgaaggagcagtccacaaag
cccattcctctgccacagtcgccaccttgcgaaggagacaatgacgacgaagaaccatcc
aaattaaaagtggagcaccatggcctttcagtcactggtctacagagcccagacagagtt
ttgggattagaatcgcccttaatttcatcaaaacctcagtctcattcactgactacccct
ggcaaatcagaggcagaacatctctttgtgactgcaacacagtttgcaaaggagcagcat
gcaaatgggacactgaaggaagatgatggcagttatccaatcccagagccacacttgcct
gtgtcagaggagcggtgggcgttagacgcactgagaaatttgggcttgttgaagcagctg
ctggcccagcagtttggtctgactgagaagagcacccaggaagactggcagtccttctca
agatacgggtcagcttctgaagaggggcaggcagagagtggcatccaggactctgaaaat
gttaaggcatgtcatgccggggaaggacagatgccttttaaaactggaactggtgacttt
gcaacttgtgacagtccacggacttcaactgagtcttgtgctacacaagattcagtgata
ctggcatcccaagacagccaggcaagtaacattttagtaatggaccacatgatcctgacc
ccagagatgcctactgcagagccagaagggggtctggatgacagtggagagcactttttt
gatgcccgtgaagcacatagtgatgataatccatcagaaggtgacggagcagttaaaaag
gaagagaaggatgttaatttacgcatctcaggaaactgtttgatccttgatggctatgat
gcagtgcaggagagctccacagatgaggaggttgcctcctcattcaccctgcagcctgta
gcaggcatcccttctgtggactccacccaccagcagcaatactcccctcagaatgctcat
tctgatggggcagtttcaccattcaccccagaagtcctggtccagcgacgctggagagct
atggaggatgcttgttttgagatccagagtccctctttttgtacagattcacaaagccaa
atcctggagtacattcataaaatagaggctgacctcgaacacttaaagaaggtggaggaa
agttacgcccttctttgccaaaggctggctagctcagccctccctgacaagctctcagat
aagagttag
DBGET
integrated database retrieval system
