Chionomys nivalis (European snow vole): 130872633
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Entry
130872633 CDS
T11437
Symbol
Atg4d
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04136
Autophagy - other
cnl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130872633 (Atg4d)
04136 Autophagy - other
130872633 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnl01002
]
130872633 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130872633 (Atg4d)
03029 Mitochondrial biogenesis [BR:
cnl03029
]
130872633 (Atg4d)
Peptidases and inhibitors [BR:
cnl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
130872633 (Atg4d)
Membrane trafficking [BR:
cnl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130872633 (Atg4d)
Mitochondrial biogenesis [BR:
cnl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130872633 (Atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
130872633
NCBI-ProteinID:
XP_057622782
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All DBs
Position
4:20739445..20748907
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AA seq
502 aa
AA seq
DB search
MNSVSPAAAQYRSRSGSPEDARRPEGRRPRGQTRIPDPNSLGPSGSGGAALGSSGTDPAE
PDEVDKFKAKFLTAWNNVKYGWAVKSRTSFSKISTVHLCGRRYHFEGEGDIQRFQRDFVS
RLWLTYRRDFPPLSGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWVDGTGVASSE
MPGPASPSRYQGPGRRVPPRWTQGTLEMEQDRWHRRIVSWFADHPQAPFGLHRLVEHGQS
SGKKAGDWYGPSVVAHILRKAVESCSEVTHLAVYVSQDCTVYKADVARLVSWPDPTAEWK
SVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPH
YCQPTVDVSQADFPLEVRWWLWVGAAGTVTKLGYLKSLPSAQSFHCNSPRKMAFAKMDPS
CTVGFYAGNRKEFETLCSELMRILSSSSATERYPMFTVAEGHAQDHSLDALCTQLSQPTL
RLPCTGRLLKAKRPSSEDFVFL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcggcgcagtaccgcagccgcagcgggagcccggaggac
gcgcgccggcccgagggtcgccggccgaggggacaaacccggatcccggatcccaacagc
ctgggaccttcgggatccggcggggcagctctaggctcatctggaaccgaccccgccgag
cctgacgaggtggacaagttcaaagccaagttcctgacagcctggaacaacgtcaagtat
ggttgggcagttaaaagccggaccagcttcagcaagatctctactgttcacctctgtggg
cgacgctaccatttcgagggagagggtgacatccagcggtttcaaagagactttgtatct
cgactatggcttacatatcgccgggacttcccacccttatctgggggcagcctgacctca
gactgtggctggggatgtatgttacgaagtggtcaaatgatgctggcccagggcttgctc
ttgcattttctgcctagagactggaggtgggtggacggcacaggagtagcttcttctgag
atgccagggcctgcctctcccagccgctaccaagggcctggtcgtcgtgtgccaccacgg
tggacccagggtacactggagatggagcaggatcgttggcaccggcggattgtgtcctgg
tttgctgaccatccccaggccccctttgggctacatcggctagtggaacatgggcagagc
tctggcaagaaggcaggagactggtacgggccctctgtggtggcacacatcctcaggaaa
gctgtggagagttgctcggaggtcacccacctggcggtgtacgtctctcaggactgcaca
gtgtacaaggcagatgtggcacgcctggtgtcgtggccagaccccacagctgagtggaag
tctgtggttatcctggtgcctgtacgcctgggtggtgagacccttaaccccgtgtatgtg
ccctgtgtgaaggagcttctgcggtcagaactctgcctgggcatcatggggggcaagccc
cggcattcactgtacttcattggctaccaggatgacttcctgctctacttggatccccac
tactgccagcctactgtggacgtcagccaggctgactttcccctggaggtgagatggtgg
ctttgggtgggagctgcaggcacagtcacaaaattggggtacctcaaatctctcccatct
gctcagtcctttcactgcaactcacctcgcaagatggcctttgccaagatggaccccagc
tgcactgtcgggttctacgctgggaacaggaaggagtttgagactctctgctcggagctg
atgaggatcctcagctcctcctcagccacagagcggtaccccatgttcactgtggctgag
ggccacgctcaggaccacagcctggatgccctctgcacccagctctcacagcccacattg
cggctgccttgcacaggacgcctcctgaaggccaaacggcccagctctgaggactttgtg
tttttatag
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