Chionomys nivalis (European snow vole): 130872716
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Entry
130872716 CDS
T11437
Symbol
Lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnl03037
]
130872716 (Lrrc49)
04812 Cytoskeleton proteins [BR:
cnl04812
]
130872716 (Lrrc49)
Cilium and associated proteins [BR:
cnl03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
130872716 (Lrrc49)
Cytoskeleton proteins [BR:
cnl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
130872716 (Lrrc49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
FTH
LRR_LRWD1
TAFII28
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130872716
NCBI-ProteinID:
XP_057622900
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All DBs
Position
4
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AA seq
761 aa
AA seq
DB search
MIPGKYRSVSGRAANNVNCGLHLVIQTSSLSDKNKVEFKLNRETPSFPGRLLQHDLERNY
SSRQGTVREQRTGDGRVISPSPRNKSSCVSSTTNVTELCGLDMRTATSSLAAFGDSSIQT
PSKPRIRQGCHSAGPNVSAGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVC
PIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGK
NRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLT
ELNLRHNQITSVRDVDNLPCLQRLFLSFNNISSFDSVSCLAESTSLSDITFDGNPIAQES
WYKHTVLQNMMQLRQLDMKRITEEERRVASVVAKKEEEKKRESHKQSLLKEKKRLTINNV
ARKWDLQQRVANLATTQDRKDSESPLQEPCQMDGSAVSAFPEETGSLDPGLSSALQGLSV
TETHLVEIEGETLSLYGSGALECLDRNWSVQTASMVTTVSFTFIEFDEIVQVLPKLKMKF
PNSLHLKFKETNLVMLQQFNALAQLRRVDQLTIDPQGNPVVNFTLWKYYVLFRLSHFGMQ
KINGTEVTQNDMIMAERLFGILAHVASSELPQYRMISILGDARKKQFRYLIESKGKKPGI
ISEETSDSKRLMGENTNRATLNYTTREFYHEKLEEIKDKKKFCKMYVEDLVKEATAINMK
NEALQKLWPQMFIELVRDAVIEIRSKDSYMKLCLQQITDQK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgggaaataccgctccgtttctggccgagctgcaaacaatgtgaactgcgga
cttcatctggttattcaaacgtcgtcactttctgacaaaaacaaagttgaattcaagctt
aatagagaaacaccatcatttcctggcagactgttgcagcatgacctagagagaaactac
tccagtaggcaaggtactgtcagagaacagagaacaggagatggaagagtaataagtccg
tcgcctcgtaataagtcatcatgcgtctcatccacaacaaatgtgacagaactctgtggg
ctggacatgagaactgccacaagctccctggcagcattcggagactcttccattcagaca
ccttcaaagcccagaatccggcagggctgtcatagtgctggccccaatgtatctgcaggt
gatcatattaatctggtgagctcatcaatgccatcgtttcctattctccagcgttcctct
gaagagaaaattctttactcagacaggctgaccctggaaagacagaagttgactgtgtgt
cctatcatcgatggggaagaacaccttcgtttattgaattttcagcacaattttataact
cggatccagaatatttctaatctacagaggttaatattcttggacttgtatgataaccag
attgaagaaatcagtgggctttccactctgaggtctctccgtgtccttctgttagggaaa
aacagaatcaagaaaatctcaaatctggagaatttaaaaaatttagatgtcttggacctt
catggaaatcagataaccaagattgaaaatgtcaatcatttgtgtgatttgagagtttta
aaccttgccaggaacctcttgagtcacgttgacaatctcaacggtctggattctctaact
gaacttaaccttcgacacaatcagatcacttctgtgagagatgtggataatttgccctgc
ctccaacgcctctttctcagcttcaacaatatatctagctttgatagtgtttcctgcctt
gctgaatcaacgtccctctcagacatcacctttgatggcaatccaatagctcaagagtca
tggtacaaacacacggtccttcagaatatgatgcagctgcgccagctagacatgaagaga
atcacggaagaagaaagacgtgtggcatctgttgtagccaaaaaagaggaggagaagaag
agggaaagtcataagcagtctttgctgaaggagaagaaaaggctaacaattaacaatgtc
gctcgaaagtgggacttgcagcaacgagtagccaatcttgccaccacccaggacagaaag
gactctgagtcccctctgcaggaaccctgtcagatggatggaagcgccgtctctgcattt
ccagaggaaacagggtctctagacccagggctcagcagtgcgttacaaggcttgtcggtc
acagaaacacacttggtggagatagaaggggaaaccctttccctgtacggctcaggggca
ctggaatgcctggatcggaactggagtgttcaaacagccagcatggtcaccaccgtctct
ttcacattcatcgagtttgatgaaattgtccaagtgcttcccaaactgaagatgaagttt
ccaaattctctgcaccttaaattcaaggagaccaatctcgtaatgctgcagcagttcaat
gccctagcacaacttcgtcgggttgaccagttgacaattgatcctcagggaaacccagtg
gtcaactttacactctggaaatactacgtgctgtttaggctcagccacttcggcatgcag
aaaataaatggaacagaggtgacacaaaatgatatgataatggctgagcggctctttgga
atcctggcccatgtggcatcttccgagttgcctcagtaccgcatgatctcaattctgggt
gatgccaggaagaagcaattccgatacctaatagaaagcaaaggtaaaaaacctggtatt
atcagtgaggagaccagcgacagcaaaaggctcatgggagaaaacacgaatcgcgctacc
ctgaattataccaccagagaattctaccacgagaagctggaggagataaaggacaaaaag
aagttctgcaagatgtatgtggaagacctcgtgaaggaagccacagcaatcaacatgaaa
aatgaggctctgcagaagctgtggccacagatgttcattgagctggtcagagacgccgtc
atagaaatccgcagcaaggattcctacatgaagctctgcctgcagcagatcactgaccag
aaatag
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