Chionomys nivalis (European snow vole): 130872812
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Entry
130872812 CDS
T11437
Symbol
Cald1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130872812 (Cald1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnl04812
]
130872812 (Cald1)
Cytoskeleton proteins [BR:
cnl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130872812 (Cald1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
130872812
NCBI-ProteinID:
XP_057623078
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All DBs
Position
1:complement(168262524..168452277)
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AA seq
534 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVTDQVEAHAQNSVPDEGSKPATTNTQIEGDEEAALLERLARREERRQKRLQEALERQKE
FDPTVTDASLSVPSGSMQNDTAENETAEKEEKRESRPGRYEVEETEVVTKSYQKNSHQDA
EDTKKEEKEEEELKGGSVGENQIKDEKIKKDKEPKEEVKSFLDRKKGFTDVKAQNGELMT
HKLKQTENAFSPSRPGGRASGDKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQ
EAALELEELKKKREERRKVLEEEEQKRKQEEAERKAREEEEKRRLKEEIEKRRAEAAEKR
QKMPEDGSSEDKKPFKCFTPKGSSLKIEERAEFLNKSVQKSGVKSTHQAAVVSKIDSRLE
QYTNAIEGTKASKPPKPAASDLPVPAEGVRNIKSMWEKGNVFSSPSASGTPNKETAGLKV
GVSSRINEWLTKSPDGNKSPAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKQV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgtcgccgagaactcaggaggcaaaagagggaggagatgcggctg
gaagcagagagaatcgcctaccagaggaatgatgatgatgaagaagaggccgccagggaa
cggcgtcgccgagcccggcaggaaaggctgcggcagaagcaagaggaagaatccttgggg
caggtgactgaccaggtggaggctcatgcccagaacagtgttcctgatgaagggtctaag
ccagccaccacgaacactcagatagaaggtgatgaggaggctgccttactggagcgcctg
gccaggcgtgaagagagacgccagaaacgcctccaggaagccctagagcgtcagaaggag
tttgatccaactgtaacggatgccagtctgtccgtcccaagcggaagtatgcaaaatgac
acggcagaaaatgaaacagcagagaaggaagagaaaagggagagtcgtccaggacgatat
gaggtagaggaaacagaagtcgtcaccaagtcctaccagaagaacagccatcaggatgct
gaagacacaaagaaagaagaaaaggaggaggaggagctgaagggagggagcgttggcgaa
aatcagatcaaagatgagaagattaagaaggacaaagaacccaaagaagaagtcaagagc
ttcttggatcgaaagaagggatttacagacgtgaaggcacagaatggagaactcatgact
cacaagcttaaacaaaccgagaatgctttcagccccagccgccccggaggccgggccagt
ggggacaaggaagccgaaggtgccccacaagtggaagccggcaagaggctggaggagctg
cgccggcgccgcggggagactgagagtgaagagtttgaaaaactcaaacaaaagcaacag
gaggcagccttggagctggaagagctgaagaaaaagagggaagagaggaggaaggtcctg
gaggaagaggagcagaaaaggaaacaggaggaggctgaacgaaaagctagagaagaggaa
gagaagaggaggctaaaggaagagattgaaaagagacgggcagaagctgctgagaaacgc
cagaagatgccagaagatggctcgtccgaggacaagaagccattcaagtgtttcactccc
aaaggctcatctctcaagatagaggaacgagcagagtttttgaataagtcagtgcagaaa
agtggtgtcaaatcgacgcatcaagcagcagtagtctccaagattgacagcaggctggag
cagtataccaacgcaatcgagggaacaaaggcttccaaacctcctaagcctgcagcctcg
gatctccctgtccctgctgaaggggtccgcaacatcaagagcatgtgggagaaagggaat
gtgttctcttccccctctgcctcgggaacaccaaataaggaaaccgctggcctgaaggtg
ggagtttccagccgcatcaatgaatggctaactaaatcaccagacggcaacaagtcacct
gctccaaagccttctgacttgaggccaggagatgtatctggcaagcggaacctctgggaa
aagcaatctgtggataaggtcacttctcccactaagcaggtttga
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