Chionomys nivalis (European snow vole): 130873700
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Entry
130873700 CDS
T11437
Symbol
Ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130873700 (Ddx43)
Enzymes [BR:
cnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130873700 (Ddx43)
Spliceosome [BR:
cnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130873700 (Ddx43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
ATG32_M
ATG30_helical
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
130873700
NCBI-ProteinID:
XP_057624583
LinkDB
All DBs
Position
4:77432543..77464146
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AA seq
649 aa
AA seq
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MSRRESAANASSSSVAPRRSSAGSRSAGRTAAEEPNRRGRVGSSRGAAGGLREPAGATAE
ATASASRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVIKGSPEAEIKIFGNK
AMQTKAKTVIDNVVKKQQNYIPGHKVDTIEVQPSVGADTSTFDSVTEDQPLIDWDQIRED
ALKWEKKKWADLPPIKKNFYIESATTSSMSKVQIDNWRKENFNITCDDLKDGEKRPIPNP
ICKFEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMP
GFIHLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYSDLKSVCVYGGGDRDGQI
QDVSKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRP
DRQTIMTSATWPSAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQT
FLENMSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVR
ILIATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVA
TELINILERANQSIPEELVLMAERYKANKLKREMEKKMGKPQGKPQKFH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcgggagtccgcagccaacgcttcctcttcgagcgttgctccccggcgaagc
tcggcggggtcccgcagcgccggtcgaacggcggcggaggaacctaaccggaggggccgg
gtcggcagcagcagaggggctgccggcggcttgagagagccagcgggtgccaccgccgag
gccacggcctccgccagccgccgcgaaccgccgctctgcttcggggtgaagaacgacgtg
gtgggcgcggtgataggtcgtggtgggtcaaaaattagagaaatccaaaatacaacaaac
actagaatacaggtaataaaaggaagtcctgaggcagaaatcaaaatttttggtaataaa
gccatgcaaacaaaagcaaaaacagtgatagataatgttgttaaaaaacaacaaaattac
attccagggcacaaagttgatactattgaagtccaaccttctgttggagcagataccagc
acatttgacagtgtaacagaagatcagccattgatagattgggaccaaattcgagaagat
gctttgaagtgggaaaagaaaaagtgggcagatttacctccaattaagaaaaacttttac
atagaatcagcaacgaccagctcaatgtcaaaagtgcagatagacaactggaggaaagaa
aattttaatataacatgtgatgacttgaaagatggtgagaaacgtcctatccctaaccct
atatgtaaatttgaagatgcctttcaaagttacccagaagttatggaaaacattaaaaga
gcaggctttcaaaaacctacaccaattcagtcacaggcgtggccaatagttctacaagga
atagatcttattggagtagcacaaactggaacagggaagacactgtcctatttaatgcct
ggatttatccacctagactctcaaccactagctagagaacaaagaaatggaccaggcatg
ctagtccttacaccaacccgggaattagcccttcaagtagaagctgaatgttctaaatat
tcatatagtgatcttaaaagtgtttgtgtatatggtggtggcgatagagatggacaaata
caagatgtttcaaaaggtgtagacatcattattgcaactcctggaagattgaatgaccta
caaatgaataactttgtcaacctgaaaagtgtaacctatttggttttagatgaagcagac
aagatgttggacatgggatttgaaccccagataatgaagattttgttagatgtacgccca
gaccgtcagactattatgacaagtgctacttggccatctgctgtccgccgtcttgcacag
tcttatttgaaagagccaatgattgtctatgttggtactttggatctagttgctgtaagt
acagtgaagcaaaatataatcatcaccacagaagaagagaaacgaactcatatccaaacc
ttcctagagaatatgtcacctaaagataaagtcattgtgtttgtcagcagaaaagccgtt
gctgatcacttatcaagtgacctgattcttcgacacatatcagtggagtctctgcatggc
aacagagaacagagtgaccgggagaaagcattagagaactttaagacaggtaaagtgaga
atacttatcgctactgacttagcatctcgaggtcttgatgtccatgatatcactcatgtc
tacaattacgattttccacggaacattgaagaatatgtacacagagtaggacgcactggg
agagcggggcgaactggtatgtcaattacacttatcacaagaaatgattggagggttgcc
actgaattgattaatattctggaaagagcaaatcagagtatcccagaggaacttgtctta
atggccgagagatacaaagcaaataaactaaaaagagagatggaaaaaaaaatggggaaa
cctcaagggaagccacagaagtttcactaa
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