KEGG   Chionomys nivalis (European snow vole): 130873792
Entry
130873792         CDS       T11437                                 
Symbol
Col6a5
Name
(RefSeq) collagen alpha-5(VI) chain
  KO
K06238  collagen type VI alpha
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl04151  PI3K-Akt signaling pathway
cnl04510  Focal adhesion
cnl04512  ECM-receptor interaction
cnl04518  Integrin signaling
cnl04820  Cytoskeleton in muscle cells
cnl04974  Protein digestion and absorption
cnl05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    130873792 (Col6a5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130873792 (Col6a5)
   04518 Integrin signaling
    130873792 (Col6a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130873792 (Col6a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130873792 (Col6a5)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    130873792 (Col6a5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    130873792 (Col6a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cnl04147]
    130873792 (Col6a5)
   00536 Glycosaminoglycan binding proteins [BR:cnl00536]
    130873792 (Col6a5)
Exosome [BR:cnl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130873792 (Col6a5)
Glycosaminoglycan binding proteins [BR:cnl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130873792 (Col6a5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   130873792 (Col6a5)
SSDB
Other DBs
NCBI-GeneID: 130873792
NCBI-ProteinID: XP_057624730
LinkDB
Position
4:complement(102411781..102533301)
AA seq 2630 aa
MKLQLIAFILILWTETLAYQSPGPGPEYADVVFLVDSSDGLGSKSFPFVRTFLTKLISSL
PIEADKYRVALAQYSDALHNEFQLGTFKNRNPVLNHLKKNFQFIGGSLKIGNALQEAHRT
YFSGPTNGRDKKLFPPILVVLASSESEDDVEDASEALREDGVKIISVGVQKASEENLKAM
ATSQFHFNLRTVRDLSAFAANMTQIIKDVTKYREGTAVALFTPPAPTTPAAPITPATLTT
AATDAEKTVPVPISCQRDSLADIIFLVDESVGTTQNLRDLQSFLENVTNSVDVKDKCMRL
GLMSYSDRVQTIASLKSSANQSEFQQQIQKLSLRAGGSNVGAAIEKMRREGFSESGGSRK
AQGVPQIAVLVTHRPSDDAVREAALDLRLDGVTMFALGIEGANGTQLEDIASYPSKQSIS
THSSYSHLESYSGNFLKKIHNEIWTQVSTHAEQIELDKTGCVDTKEADIYFLIDGSSSIL
KKQFEQIQIFMSSVIDMFPIGPDKVRVGVVQYSHKNQEEFPVSLYVDGTALKKAVFNIKQ
LKGRTFTGKALDFILPIIKKGKSERADETPCYLIVLTDGKSEDSVLEPANRLRAEHVTIH
AVGIGEANKTQLQQIAGNDERVNFGQNFDSLKNIKNEIVHRICSEKGCEDMKSDIMFLVD
SSGSIGDANFETMKTFMKNLVGKIQIGANKTQVGVVQFSDYNKEEFQLNTFFTHKEIYAA
IDRMSPINRNTLTGSALTFVNEYFDLSKGGRPQVRKFLILLTDGQAQDEVGGPAMALRNK
SVTIFSVGVYGANRAELEEISGDGSLVFHVENFDHLKAIESKLIFRVCALHDCKRIELLD
IVFVLDHSGSINSQQQESMINLTIHLVKKADVGRDRVQFGALRYSNDPEILFYLNTYSSK
SDIVEHLRRRRDTGGGTYTAKALQHANILFTEEHGSRLRQNVRQLMIVITDGESHDRDKL
NATAWGLRDKGITIFAVGVGDANKDELETMAGKKENTIHVDNFDKLRDIYMPLQETLCNS
SQETCNLQEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIQSQRMKIGMAQYGSRYQ
EIIELESSLNKTQWKSRIQAVAKSQGFPRIDFALKHVSDMFHPSVGGRRNAGVPQTLVVI
TSGYPRYDVAEAVKALKALGICVLALGIGDVYKEQLLPITGNSEKIITFQDFNKLKSVDV
KKRMVREICQSCGKSNCFVDVVIGFDLSSHLQGQPLFQGHPRLESYLPNILADITSIRGV
SCGAGAEAQVSLAFMVNSDQEFPAKFQIYQKAVFNNLLQVTVRGPTHLNAQFLQSLWDVF
EENSASRGQVMLIFSDGLQGESITMLEQQSDRLREAGLDALLVVSLDALAQDEFSSFEFG
KGFDYRTHLTIGMTDLGKTLSQYLGNIAERACCCTFCKCPGIPGPQGTRGLQASKGSSGL
KGSRGHRGEDGDPGRRGEVGPHGDRGIIGCQGTRGQKGVKGFSGAQGEHGEDGLDGLHGE
DGFYGLRGGKGEKGDTGFQGSPGSRGAPGEDGAKGFPGDPGNPGRDSTIKGQKGAKGDRG
SQGRTGWKGTQGSPSSGGSRGMEGQRGLQGPSGEAGDLGPQGAQGPEGLQGPQGSSGNLG
EKGEKGGQGYQGPQGSPGPAGPRGSIGRPGFWGRKGELGVPGGPGPAGPPGQRGEQGDHG
IPGYGQTGRKGVKGPAGFPGDPGQKGDSGDPGSPGGPGPKGFKGLTLSQGLKGETGRPGS
QGPPGPRGPKGTAGQPAYSHCDLIQFLRSHSPCWKEKCPVYPTELVFALDQSSGITERRF
NETRDIITSIVSDLNIRENNCPLGARVVVVSYDSDTSYLIRGSDYQSKKHLLQLLSQIKY
QVPQKARDIGNAMRFVARNAFKRTSSGSNVRRVAVFFSNGQAASRESILTATMEFSALDI
SLAVFAYNERVFLDEAFGFDDTGTFQVIPVPPVGNYEPLERLRRCTLCYDKCFPNTCAEE
TFFPENSYMDVALLLDNSRHIANDDFQAMKTLVSSVIDNFHITSNPSASDRIALLSYSPS
ENSRKKSKVKTEFEFTAYDNQAIMKNFVHTSIRQLNGDATVGLGLQWAMENLFPGTPNLR
KHKVIIVISAGENHEEEEFVRTVSLRAKCQGYVIFVVSLGSTQRDELEQLASYPRDHHLI
QLGRMHKPDLNYIVRFLKPFVYSVRRRFNQYPPPMLEGDCRRLNIERGDALHGSLRLAAN
LHEVSASKSSLFGQELSAGKDSSFMLEDHGGDHLVYMANQMLKPETLVSHYENDQGSAAM
ASLTSEHENHGREELGLADEPGDVSLQDYYMDVAFLIDASQRVGNDVFQEVKALTTSVLD
YFHIAPDPLTSVLGDRVAVLTYSPPGYLPDTEECPVYLEFDLLTYNRVHQMKHHLQESLK
QLNGDVFIGHALQWTIDNVFVGTPNLRKNKVIFIISAGETSPLDKEVLQKASLRAKCQGY
SIFVFSFGPVHNDMELEGLASHPLDHHLVQLGRIHKPDMDYIIKFVKPFVHSIRRAINKY
PTRELQAKCANITFPSPENVGAEDSFFLFPEVYKIETRDSEQFGDSSSQEQHFFILGDNH
GNHSGTTADLIQKLYMLFSSEEVMVNDKEEPHWEETAAAVNDKQDGEDAS
NT seq 7893 nt   +upstreamnt  +downstreamnt
atgaagctccaactaattgcattcatcctaatcctctggactgaaacgctggcatatcag
agtccaggacccggccccgagtatgcagatgtggtgtttctggtggacagctctgatggc
ctggggagtaagtccttcccatttgtgagaactttcctcaccaagctgatcagcagcctc
cccatagaggccgacaagtaccgtgtggccctggcccagtacagcgatgctctccacaat
gagttccagctgggcaccttcaagaacaggaaccccgtgctgaaccacctgaagaagaac
ttccagttcatcggtgggtccctgaagatagggaacgccctgcaagaggctcacaggacc
tatttctctggccccactaatggaagagacaagaaactgttccccccgatcctggtggtg
ctggcttcatccgagtctgaggatgatgtggaagacgcttcggaggccctgagggaagat
ggggtgaagatcatctcagtgggggtgcagaaggcttctgaggaaaacctgaaggccatg
gccacatcccagttccatttcaacctcaggacagtcagagacctcagtgcgtttgccgcc
aacatgacacagatcatcaaggacgtaactaagtacagggaaggaacggctgtggccctg
ttcacgcctccagctccaaccacgcctgcagccccaattacacctgcgaccctaaccaca
gctgcaaccgatgctgaaaagacagttcccgttcccatatcctgccagagagactccctg
gctgacattatattcttggtggacgagtcagtggggaccacacagaatctgagggacctg
cagagcttcctggagaatgtcaccaactctgtggacgtgaaggacaagtgcatgcggctt
gggctgatgagctacagtgacagggtccagactattgcgtccctgaagtcaagtgccaat
cagtctgaattccagcagcaaatccagaaactctcccttagggctggggggtcgaatgtg
ggggccgccatcgagaagatgaggagagaaggattctcggagtctggtggcagcaggaag
gcacagggcgtccctcagattgctgtgctggtcacccacaggccatcggatgatgcagtg
cgcgaggctgcgctggaccttcgcttggatggcgtaactatgtttgctctgggcatcgaa
ggggccaacggcacgcagttggaagacatcgcgtcctatccttccaagcagagcatttcc
acacacagctcctacagtcacttggaatcgtacagtgggaacttcctgaagaagatccac
aatgaaatctggacccaagtttctacccatgctgaacaaatagaactcgataaaactggc
tgtgtggatacaaaggaagcggatatctacttcctcattgatggctcgtccagcatcctt
aagaaacagtttgagcaaatccagatatttatgtcctctgtgatagacatgtttcccatt
ggtcccgacaaagttcgagtaggggtcgtgcagtattcacataagaaccaagaggaattt
cccgtctccctctacgtggatggcacagccttgaagaaggctgtttttaacatcaagcaa
ctcaagggccgcacattcactgggaaagccttggatttcatactgccaataataaagaag
gggaaatcagagcgggcagatgaaaccccctgttacctcatcgtactgactgatgggaag
tcagaagacagtgttctagaacctgctaacagactcagggctgaacatgtcaccattcat
gcagttgggattggtgaggcgaataagacacaacttcaacaaattgccgggaacgatgaa
agggtcaactttgggcagaattttgattccctaaagaacataaaaaatgaaattgtacac
cgcatctgctctgaaaaaggatgtgaagacatgaagtctgatatcatgtttttggtggac
agttctggaagcataggggatgcaaattttgagacaatgaaaacctttatgaaaaacctg
gtggggaagatccagattggtgccaacaaaacgcaagttggtgttgttcagttcagcgat
tacaataaggaagaatttcagctgaatacattcttcacacacaaagaaatttatgccgcc
atagacaggatgtcacctatcaacagaaacactttgacgggaagcgccctgacctttgta
aatgaatactttgacctttccaaggggggccgtccccaggtcagaaagtttctcatcctc
ctcacagatggacaagcccaagatgaagtagggggtcctgcgatggctctcaggaacaaa
agtgtgaccatcttttctgtgggtgtgtatggtgccaatagggccgagctggaggaaatc
agtggggatggcagcctggttttccatgttgagaactttgatcatctgaaggcgatagag
agtaaactcatcttccgcgtgtgtgctctgcatgattgcaagaggatcgaactcttagac
atcgtgtttgtgctggaccattcaggcagcataaattcacaacaacaagaaagcatgatt
aacctcaccatccacttggtgaagaaggcagatgttggcagggaccgagtccagtttgga
gctctcagatattccaacgatcccgagattcttttctatcttaacacatactcaagcaaa
tcggacatcgtcgagcacctgagacgacgcagggacactggagggggaacctacactgcc
aaggctctccagcacgccaacatcctgttcacagaagagcacggcagccgcctgaggcag
aatgtgaggcagctgatgattgtcatcacggatggcgagtcccatgacagagataaactc
aacgccacagcatggggactaagggacaaaggcatcaccatctttgcagttggtgtagga
gatgccaacaaagatgaactggagaccatggcagggaagaaggaaaatactatccatgta
gacaattttgacaaactgagagatatttacatgcctctgcaggaaactctgtgcaatagt
tcacaagagacctgtaaccttcaggaagctgatgtgatcttcctttgtgatggctctgac
atggtgtctgattcggagtttgttaccatgacaactttcttgtcagacttaattgataat
tttgacattcagtctcaaagaatgaaaatcgggatggctcagtacgggagccggtatcag
gaaatcattgagttggagagctccctgaacaaaactcagtggaagtctcggatccaagct
gtggccaagagccagggctttccgcgaatcgactttgctctgaagcatgtgagcgacatg
tttcatccctctgtcggaggcaggagaaatgctggtgttcctcagactttggttgtcatc
acgtctggttatccccgctatgatgtggcagaagcagtaaaagccctgaaagcccttggc
atctgtgtcctggctctgggcattggagatgtttataaggaacaacttctgcccatcaca
ggcaattcagaaaaaataattactttccaagactttaataaattgaagagtgtggacgtg
aagaaaagaatggtccgcgagatctgccagagctgcgggaaatccaattgctttgtggat
gtagtgattgggttcgacctttccagtcacctccagggccagcctttgttccagggccat
ccccgcttagaatcatacctcccaaacatcttagcggacatcacctccatcagaggggtg
agctgtggagcaggcgcagaggcacaggtgagcctggcctttatggtgaacagtgaccaa
gagttcccagccaagttccaaatttaccagaaagcagtgttcaacaacttgctgcaagtc
accgtccgtggcccaactcatctgaacgcccagttcttgcagtctctctgggacgtgttt
gaggagaactctgcctccaggggccaggtgatgcttatcttctcagatggtctccagggc
gaaagcatcaccatgctggagcagcagtcggacaggctcagagaagcaggactggatgct
ctgttggtggtgtcccttgacgcattggctcaggatgagttttccagctttgaatttgga
aaaggatttgactataggactcacctgaccattggaatgacagacctgggcaagacactt
tcccagtatctgggaaacatcgcagagagggcttgttgctgtacgttttgtaaatgtcca
gggattccaggacctcaagggacccggggactccaagcctccaagggctcttcaggcctg
aaaggcagccgaggacacaggggagaggatggagaccctggaagacgaggagaagttgga
cctcacggagacagagggatcataggatgtcaggggactcgaggccaaaagggcgtcaaa
ggattttctggagcccagggagaacacggagaagatgggcttgatggactgcacggagaa
gatggattttatggacttcgtgggggaaagggagaaaaaggtgacactggctttcagggc
agcccaggttccagaggtgcccctggggaagatggagcgaagggcttccccggggatccc
ggtaacccaggacgagacagtaccatcaaaggccagaagggcgccaaaggagaccgagga
agccaagggagaactgggtggaaggggacacaaggcagtcctagctccggaggaagcagg
ggaatggaaggccagaggggactccagggtccctcgggggaagcaggagacctgggacct
caaggtgcacagggaccagaaggactacaaggccctcaggggtccagtggaaacctaggc
gagaaaggagaaaaaggaggccaagggtaccagggacctcagggttctcctggaccagca
ggacctagagggagcattggaagacctggattttgggggagaaagggggaactcggagtt
cctggaggccccggaccagcaggaccccctggacagcgaggtgaacagggagatcatggc
atcccgggctatggccagacaggacgaaaaggagttaagggcccagcaggattccctggg
gatccaggacagaagggtgactctggagatcctggaagtcctgggggacctggacccaaa
ggattcaagggactgactctctctcaaggcttgaaaggcgagactggaagaccagggtct
caaggccctcctggaccgagaggtcctaaaggcacagcagggcagcctgcgtattctcac
tgtgatctgatccagttcctgcggagccacagtccctgttggaaagaaaagtgtcccgtg
tatccaacagagctggtatttgctctggaccagtcctctggaatcacagaaaggagattt
aatgaaacaagagacatcatcacatccattgtcagcgacctcaacatcagggaaaataac
tgtcctctcggagcccgggttgttgtggtttcctatgactcagacaccagctatctcatc
cgtgggtctgactaccagagcaagaaacatctccttcagcttctttcccaaataaaatac
caagtcccccagaaggccagggacattggcaacgcgatgaggtttgtggcccgcaatgct
ttcaagcggacatcttcaggatccaacgtcaggagagttgcggtgttcttcagcaacggc
caggcagccagcagagagtccattctcacggccacaatggagttcagtgccctggatatc
agccttgctgtctttgcttataatgaaagagttttccttgatgaggcttttgggtttgat
gacaccgggacatttcaggtgattccagttcctccagttgggaattatgagcccctggaa
agacttcggcgctgcacactttgctacgacaagtgttttccaaatacttgtgcagaagag
actttctttcctgaaaattcatacatggatgtagcattgctcttagacaattcccgtcac
atagccaatgatgacttccaagccatgaagacattggtgagctcagtgattgacaacttc
cacatcacttcaaacccttcagcctcggacaggattgcgttgctgagctattctccctca
gaaaattccagaaagaagagcaaggtgaagacagagtttgagtttacagcctacgacaac
caagccatcatgaagaacttcgtccacacctccatccgacaactaaatggagatgccact
gttggtcttggcctgcagtgggccatggagaatctcttcccaggaacccccaatctaaga
aagcacaaggtcatcattgtgatttcagctggggagaatcatgaggaggaggaatttgtg
aggacggtatctttgagggccaaatgtcaaggctatgtcatatttgtggtttctttgggc
tccacacaaagagatgagttggaacagttagccagctacccacgcgatcaccatctgata
cagcttgggaggatgcacaagccagatctgaattatattgtgaggtttctgaagccattt
gtatactctgtcagacgtcgcttcaatcagtacccaccgccaatgctagagggcgattgc
cggcgcctcaatatagagaggggagatgccctgcacggcagcctccgattggctgctaat
ctacatgaggtttccgcaagcaagagcagcctttttggtcaagagctgagcgctgggaaa
gactcatcttttatgttggaggatcatgggggcgaccatttggtttacatggcaaaccaa
atgctaaagccagaaacgctagtgagtcactatgaaaacgatcagggatcggcagcaatg
gcaagtctcacgtctgaacatgaaaatcatggccgagaagaactgggtcttgctgatgag
cctggagatgtttctcttcaagactattatatggatgtggccttcctcatagatgcttct
caaagagtaggaaacgatgtgtttcaggaagtgaaagctcttacaacttcggtactggat
tactttcacatcgccccagatccgctgacctctgtcttgggagacagagtggctgtcctg
acttactctcctccaggctatctgccagacactgaagagtgcccggtctacctggagttt
gatttgctcacttacaacagggtacaccaaatgaagcatcatctccaagagtctcttaag
cagctcaatggagatgttttcattggtcatgctctccaatggacaattgacaatgtcttt
gtaggaacccccaatctgaggaaaaacaaagttatctttataatatctgctggtgaaacc
agccctctagacaaagaagtcttacagaaggcatctttgagagccaagtgccaaggctac
tccatatttgtattttcctttggtcctgtacacaatgacatggagttagaaggattagca
agccaccccctggatcatcacttagtccagcttggccggatacacaagccagatatggac
tatatcataaagttcgtcaagccatttgtccattcgatcagacgtgctatcaacaaatac
cccaccagagagctgcaagccaagtgtgcgaacatcaccttccccagtccagagaatgtt
ggcgcagaagacagtttctttctcttcccagaggtgtacaaaattgaaacaagagacagt
gagcagtttggagactccagttcccaggagcaacatttctttatactgggggacaatcac
ggtaaccattcggggaccactgctgatttgatccagaagttgtacatgctcttctcctct
gaagaagtgatggtgaatgacaaggaagaaccacactgggaagaaaccgctgctgccgtg
aacgacaagcaagatggcgaggatgcaagctaa

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