Chionomys nivalis (European snow vole): 130874331
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Entry
130874331 CDS
T11437
Symbol
Nfasc
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04514
Cell adhesion molecule (CAM) interaction
cnl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130874331 (Nfasc)
04517 IgSF CAM signaling
130874331 (Nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnl04515
]
130874331 (Nfasc)
Cell adhesion molecules [BR:
cnl04515
]
Immunoglobulin superfamily
L1 family
130874331 (Nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
C2-set_2
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
130874331
NCBI-ProteinID:
XP_057625514
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All DBs
Position
5:86352725..86518153
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AA seq
1352 aa
AA seq
DB search
MDRQQALPWVHTALILFLLSPGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA
ERTPSFMYPQGTSSSKMVLRGMDLLLDCIASGVPTPDIAWYKKGGDLPSDKTKFENFNKA
LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA
NGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN
AFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHV
YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQ
LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQ
DLAKAYLTVLADQATPTNRFADLPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITD
YVIQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAVNEVGSSHPSLPSERY
RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVT
VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTEVKIRVLNST
AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFP
YSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNG
ILIGYTLKYVAFNGTKLGKQLVENFSPNQTKFSVQRADPVSRYRFSLSARTQVGSGEAAT
EETPAPPNEATPTAAPPTLPPTTVGATGLVSSTDTTALAATSEATTVPTIPTAVPTTIAT
TVATTTTTTAATTTTTTTTTTTTESPLTTTIGTKIHETAPDEQSIWNVTVLPNSKWANIT
WKHNFRPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISST
VITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVP
LGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSF
IGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcagcaggcactaccctgggtccacacagccctcatcctcttcctcctcagc
cccggaggggccattgagattccaatggatccaagcattcagaatgagctgacccagccc
ccgactatcaccaagcagtcggtaaaggaccacatcgtggacccccgtgataacatcctg
attgaatgtgaagctaaagggaaccccgcccccagctttcactggactcgaaacagcaga
ttcttcaacatcgccaaggacccccgggtgtccatgaggaggcgatctgggaccttggtg
attgacttccgcagtggcggacgacctgaggagtacgaaggggagtatcagtgcttcgcc
cgaaacaaatttggcacggcgcttagcaaccggatccgcctccaggtgtccaaatctcct
ctgtggcccaaggaaaacctagaccccgtcgtggttcaagagggtgcccccttgacgctg
cagtgcaaccccccacccggcctcccatctccagtcatcttctggatgagcagctccatg
gagcccatcactcaggacaagcgtgtctcccagggccacaatggggacctctatttctcc
aacgtcatgctgcaggacatgcagaccgactacagctgcaatgcacgtttccacttcacc
cacaccatccagcagaagaatccgttcaccctcaaggtccttaccacccgaggggtggcc
gaaagaacgcctagcttcatgtatccgcagggcacctcgagcagcaagatggtgcttcgt
ggtatggacctgctgctggactgcattgcctctggggtcccaacaccagacattgcatgg
tacaagaaaggtggggacctcccgtctgacaagaccaagtttgagaactttaacaaggcc
ctgcgcatcaccaatgtctctgaagaagactccggggagtacttctgcctggcctccaac
aagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccatactggctg
gatgagcccaagaacctgattctggctcccggtgaggacgggaggctggtatgccgagcc
aatggaaacccgaagccaactgtccagtggatggtgaatggggagcctttgcagtcggca
ccgcccaatcccaaccgtgaggtggccggggacactatcatcttcagggacactcagatc
agcagcagggcggtgtaccagtgcaatacatccaacgaacatggctacctgctggccaat
gccttcgtcagtgtattggatgtgcctcctcggatgctgtctccccggaaccagctcatc
agggtgatcctttacaatcggacacggctggactgtccgttcttcgggtctcctattcca
acactccgatggtttaagaatgggcaaggaagcaacctggatggtggtaactaccacgtc
tacgaaaacggcagcctggaaatcaagatgatccgcaaagaggaccaaggcatctacacc
tgtgtggccaccaacatcctgggcaaagctgaaaatcaagtccgcctagaggtcaaagac
cccaccaggatctacaggatgcccgaggaccaggtggtcaagaggggcactacggtgcag
ctggaatgtcgcgtgaagcatgacccctccttgaagctcacggtctcctggctgaaggac
gatgaaccgctgtacattgggaacaggatgaagaaggaagatgactccctgaccatcttt
ggcgtggcagagcgagaccaaggcagttacacgtgcatggccagcaccgagctggaccaa
gacctggccaaggcctacctcactgttctagctgatcaggccactccaactaaccgtttt
gctgacctacccaaaggacggccagaccgacccagggacctggagctcactgacctggct
gagaggagtgtgagactgacctggatcccaggggatgataacaacagccccatcacagac
tacgtcatccagtttgaagaggaccagttccaaccgggcgtctggcacgaccactccaag
ttcccaggcagtgtcaactccgctgtcctccaactgtccccatatgtcaactaccagttc
cgagtcatcgctgtcaacgaggttgggagcagccaccccagccttccgtctgagcgctac
agaaccagtggggcccctcctgagtccaatcccagcgatgtgaagggagaagggacaaga
aagaataatatggagatcacgtggacgcccatgaatgctacctctgcctttggccccaac
ctgcgctacattgtcaagtggcgacggagagagacccgagaaacctggaacaatgtcacg
gtgtggggctctcgctacgtggtggggcagacccctgtctacgtgccctatgagatccga
gtccaggctgaaaatgactttgggaagggtcccgagcctgacaccgtcattgggtactca
ggagaagattatcccagagctgcacccactgaagttaaaatccgagtcttgaacagcaca
gccatcagccttcagtggaaccgggtctactctgacacggtccaaggccagctcagagag
taccgagcttactactggagggaaagcagcttgctgaagaacctgtgggtgtctcagaag
agacagcaggccagcttccctggtgaccgcccccggggcgtggtggctcgtctcttcccc
tacagtaactacaagctggagatggttgtggtcaacgggagaggtgatgggcctcgcagt
gagaccaaggaattcaccaccccggaaggagtacccagtgccccaaggcgtttcagagtc
cgacagcccaacctggagaccatcaacctggagtgggatcacccggagcaccccaatgga
atcctgattggatacactctcaaatacgtggcctttaacggaaccaaactgggaaagcag
ctggtggaaaacttctctcccaaccagaccaagttctcggtgcagagggcagaccctgtg
tcccgctaccgcttctccctcagtgccaggacgcaggtgggctctggagaagcagccaca
gaggagacgccggcacctccaaatgaagctactccaaccgcagctcctcccacgttgccc
ccgactactgtgggtgccacaggcctagtgagcagcactgatactactgcccttgctgcc
accagtgaagccactacagtccccaccatcccaactgccgtacctaccaccatcgccacc
actgtcgccacaactactacaaccactgccgcaaccaccactaccaccaccaccaccacc
accaccacggagagtcctctcactaccaccattgggactaagattcacgaaaccgccccc
gatgaacagtccatttggaacgtcacggtgctccccaacagtaaatgggccaacatcacc
tggaagcacaatttcaggcctggaactgactttgtggttgagtacatcgacagcaaccat
acgaaaaaaactgtccctgttaaggcccaggcccagcctatacagctgacagacctctat
cccgggatgacgtacacgttgcgggtgtattcccgggacaacgagggcatcagcagtacc
gtcatcacctttatgaccagtacagcttacaccaataaccaggcagacatcgccacccag
ggctggttcatcgggctcatgtgtgccatcgcccttctggtgctgatcctgctcatcgtc
tgtttcatcaagaggagccgtggcggcaagtacccagtgcgagaaaagaaggatgtccct
ctgggccctgaagaccccaaagaagaagatggctcatttgactacagcgatgaggacaac
aagcccctgcagggcagccagacgtccctggacggcaccatcaagcagcaggagagtgat
gacagcctggtggactatggggaaggtggcgagggccagttcaatgaagacggctccttc
atcggccagtacacggtcaaaaaggacaaggaggagacagagggcaatgagagctccgag
gccacatccccggtcaatgccatctactctctggcctga
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