Chionomys nivalis (European snow vole): 130874670
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Entry
130874670 CDS
T11437
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130874670 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnl03036
]
130874670 (Ercc6)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130874670 (Ercc6)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130874670 (Ercc6)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
130874670 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130874670
NCBI-ProteinID:
XP_057626068
LinkDB
All DBs
Position
5:32267975..32339744
Genome browser
AA seq
1479 aa
AA seq
DB search
MPHEEIPNSPQPQEQDSSPSQHVSAFEDMPVGQESGGDAEAGECLSMSCESGPSTSAEAC
VLAATRRGAPLLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAMHEAS
RVAQVADAEKEYQSVLDDLMSCTTSLRQINKIIEQLSPQAATNRDVNRKLDSVKRQKYNK
EQQLKKITAKQKRLQAILGVAGAQVELDPASLEEEDAEPGPSCLGSMLMPAQEAAWEELI
RTGQMTPFGTPAPQKQEKKPRKIMLNEVSGFEKYLADQAQLSFERKKRGANRRVARKNMV
VSESSAGPNETKPDQRNQGLCQADKRLKKHIRKLQKRALQFQGKVGLPRGKKPLEPAGRL
EAEEDTEGEQSGSFPSDGEEEEQEEEEEVANLSSDDISYELKPLQKGQKRQKKTPVQEVD
DDFVPSSGEEDEALEARGGGRKVARCPDDGNEDYYKQRLRRWNQLRLQEKEQRPKLDDDS
EESDAEFDEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFL
AGLSYSKIRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAHK
KERLIRDIVRCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFR
TPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT
AYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHTVYQNFIDSKEVY
GILNGENQIFSGLVALRKICNHPDLFSGGPKNLSGLPEDELEEDQFGYWKRSGKMIVVES
LLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTS
IFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAG
TIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDASQSTETSAIFAGTG
SDVQTPKCHLKKKTPPAPETGPKCKKVSISDTSLNGAILTQEKSKSMGAAENATCRESGP
LKSDCHPSVSRTSSVVAVGEKTGAGSELEQLSVMSGDGKCSDVPTVDQTSGPSGEASTNE
KQGPSYKGECCQVQPEPVCGSERMEGHFYKHKSKRKHDVAKEETPEKCLQSKQKSKHTKH
CRDAKFEGTRVPHLVKKRRYHQQNSEKASEAEERSSDDYVLEKLFKKSVGVHSVVKHDAI
MDGANPDYVLVEAEASRVAQDALKALKFSRQQCLGAASGVPTWTGHRGVSGAPAGMKNRF
GKKRNSNLPVQRPSSRTEKCQNTVKKEGKASAPEHFSGREDGTSLSGAPSSSSLLARMRA
RNHLILPERLESSSGHLTEAAALPPSSTEHDDLLVEMRNFIAFQAQVDGQASTQEILQEF
ESKLSAAQSCVFRELLRNLCNFHRTPGGEGIWKLKPEYC
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgaggaaatcccaaactcacctcaaccccaggagcaagactcttccccaagt
cagcatgtcagcgcttttgaagacatgccagttggacaggagagtggtggggacgcagag
gctggggagtgcctctctatgtcctgtgagtctgggccttccacatctgctgaagcttgt
gtgttggcagccacaaggcgaggggcacccctgctacacattgatcggcaccagatccct
gcagtggagcccagtgctcaggccctggagctccagggcctgggtgtggatgtgtacgac
caggcggtcctggagcagggcgtgcttcagcaggtggacagtgcgatgcacgaggccagc
cgtgtggcccaggttgccgatgcggagaaggagtaccagtcagtcctggatgaccttatg
tcatgtacaacatccctgaggcaaatcaataaaattatagagcaacttagccctcaagct
gccaccaacagagatgtcaacaggaaactagattctgtgaaacggcagaagtataacaag
gaacaacagctaaaaaagataactgcaaaacagaaacgtcttcaggccatccttggagtg
gccggggcccaagtggaactggatcctgccagcctggaggaggaagatgcagagccaggg
ccatcatgtcttggcagtatgctcatgcctgcccaggaggccgcctgggaagagcttatc
cgcactggccagatgacaccgtttggtaccccagcccctcagaaacaggagaaaaagcct
agaaaaataatgctcaatgaagtatcaggctttgaaaaatatttggcagaccaagcacaa
ctgtcttttgaaaggaagaaacgaggggctaacagaagagtagctagaaaaaacatggtc
gtatctgagtcaagcgcaggaccaaatgagaccaaaccagaccagagaaaccaaggcctc
tgccaagcagataagcgcttgaagaagcatatccggaagctccagaagagggcgctgcag
ttccaggggaaagtggggttgccacggggcaagaaacctctggagcctgcggggaggctg
gaggcagaggaagacactgagggggaacagtctgggtcctttccctctgatggggaggag
gaagagcaagaggaggaggaagaggtggccaatctgtcttccgacgacatcagctatgaa
cttaagcctctgcagaagggccagaaacgccagaagaaaaccccagtgcaggaggttgat
gatgactttgtcccaagttctggggaagaagatgaagctctggaagcaagaggaggcggt
cgcaaggtagcgaggtgccccgacgatggtaatgaagattattataagcagcggttaagg
aggtggaatcagctgaggctgcaggagaaagagcagcgcccgaagctggacgatgactct
gaggaaagtgacgccgaattcgatgaaggcttcagagtgccaggcttcctcttcaaaaag
ctctttaagtatcagcagacaggtgttaggtggctgtgggaattgcactgccagcaggca
ggaggaattctgggagacgaaatgggattgggcaagaccatccagataattgccttcttg
gcaggtctgagctacagcaagatcaggactcgcggttcaaattacaggttcgagggactg
ggccccactatgattgtctgcccaacgacagtgatgcaccagtgggtgaaagaattccac
acatggtggcctccattcagagtggcaattctgcatgaaacaggctcctatgctcacaaa
aaggagaggttgatccgagatattgtacgttgtcatggagttttgataacctcttattcc
tacatccgactgatgcaagatgacattagcagacacgactggcactatgtgatcctagat
gaaggacacaaaattcgaaatccaaatgctgcagtcacccttgcttgcaaacagttccgc
acgcctcatcggatcatcttgtctggctcacccatgcagaataatctccgagagctgtgg
tcactcttcgacttcatcttcccaggaaagctaggcacattgcctgtgtttatggagcag
ttctctgtccccatcactatggggggatattccaatgcttccccagtacaggttaaaact
gcttataagtgtgcatgtgtcttaagagacaccattaacccatacctactgcggagaatg
aagtcagatgtcaagatgagcctttctttgccggataaaaacgaacaggtcttattttgc
cgtctaaccgatgagcagcatacagtctaccagaatttcattgattccaaagaagtttac
gggattctcaatggagagaatcagattttctctggacttgtagctctgaggaagatctgc
aaccaccctgatctcttttcgggtggtcccaagaatctcagtggtcttccagaagatgaa
ctagaagaagatcagtttggttactggaaacgttctgggaaaatgatcgttgttgagtct
ctgctgaaaatatggcataagcagggtcagcgagtgctgctgttttcccagtcgaggcag
atgctacacatactggaagtgttcctgagagcccacaagtattcctatctcaaaatggat
gggaccactaccatagcatcaagacagccattgattacaaaatacaatgaggacacgtcc
atcttcgtctttcttctgaccacacgggtgggtggcataggagtgaacttgaccggggcc
aacagagtcatcatctacgaccctgactggaaccccagcaccgacacacaggcccgggag
cgagcatggaggataggtcagaagaaacaggtgactgtctacaggctcctgacagccggc
accatcgaggaaaagatctaccaccgacaaatcttcaagcaatttttgacaaacagagtg
ctaaaagacccaaaacaaaggcgcttcttcaaatccaatgatctttatgaactgtttact
ctgagtagtcctgatgcatcccagagcactgaaacgagtgctatttttgcaggaactggt
tccgatgttcagacacccaaatgccatttaaaaaaaaagactccaccagccccagaaaca
ggtcccaaatgcaagaaggtctccatttctgacacatctttaaacggtgccatcctgact
caagaaaaatctaagtcaatgggggcagcagaaaatgcaacttgtagagaaagtggccct
ttgaagagcgactgtcacccgagtgtgagcagaactagcagtgttgttgcagttggagaa
aagacaggtgcagggtccgagctggagcagctgtcagtgatgagtggagatgggaagtgt
tcagatgttccaaccgtggaccaaacatccgggccatctggtgaggcgagcaccaatgag
aagcagggtccttcctacaaaggggaatgctgccaggttcagccagaacctgtttgcggg
agtgaacgaatggaagggcatttttataagcacaaatcaaaaaggaaacatgatgtagcg
aaagaagagaccccagagaaatgtctgcagtccaagcaaaagagcaagcacaccaagcat
tgtagagatgccaagtttgaaggaactcgggtcccacacctagtgaagaaaaggcgatac
caccagcagaactctgagaaggcgagcgaggctgaggaacgaagcagtgatgactatgtt
ttggaaaagcttttcaaaaaatcagtgggagtgcacagcgttgtgaagcatgatgccatc
atggatggggccaacccggattatgtgctggtggaggccgaagccagccgagtggctcag
gacgccttgaaagctctgaagttttctcggcagcaatgcctgggcgcagcatctggtgtt
cccacctggactggccacaggggtgtttctggtgcaccagcaggaatgaagaacaggttc
ggtaagaagaggaactccaacctccctgtgcagcgtccttcatcacgaacagaaaagtgt
cagaacactgtgaaaaaggaggggaaagcttccgcccctgagcacttcagtggcagagaa
gatggaacttctttgtctggagcccccagttcctcctcactcctggccagaatgcgagca
agaaaccacctcattctgccagaacgcttggagagcagcagcggacacctcaccgaggct
gctgccttgcctccctccagcacagaacatgatgaccttctggtggagatgaggaacttc
attgctttccaggcccaggtggatggccaggccagcactcaggagatcttacaggagttc
gaatccaagctgtctgcagcacagtcctgtgtcttccgagaactactgagaaatctgtgc
aatttccacagaactcctggtggtgaagggatttggaaactgaagccagaatactgctga
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integrated database retrieval system
