Chionomys nivalis (European snow vole): 130874754
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Entry
130874754 CDS
T11437
Symbol
Opn3
Name
(RefSeq) opsin-3 isoform X1
KO
K04256
c-opsin
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnl01009
]
130874754 (Opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnl04030
]
130874754 (Opn3)
Protein phosphatases and associated proteins [BR:
cnl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130874754 (Opn3)
G protein-coupled receptors [BR:
cnl04030
]
Rhodopsin family
Vision
Opsin
130874754 (Opn3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
130874754
NCBI-ProteinID:
XP_057626212
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All DBs
Position
5:19005748..19038314
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AA seq
400 aa
AA seq
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MYSGNRSGGQGYWEDGTGAEGAAPAGTLSPAPLFSPTAYERLALLLGGLALLGVGGNLLV
LLLYSKFPRLRTPTHLFLVNLSLGDLLVSLFGVTFTFASCLRNGWVWDAVGCAWDGFSGS
LFGFVSITTLAVLAYERYIRVVHSRVINFSWAWRAITYIWLYSLAWAGAPLLGWNRYILD
VHGLGCTVDWKSKDANDSSFVLFLFLGCLAVPMGIIGHCYGHILYSVRMLRCVKDLQTIQ
VIKILRYEKKVAKMCFLMAFVFLTCWMPYIVTRFLVVNGYGHLVTPTVSIVAYLFAKSST
VYNPVIYIFMMRKFRRSLLQLLCFRLLRCQRPAKNLPAAESEMQIRPIVMSQKDGDRPKK
KVTFNSSSIIFIITSDDSLSVDDSDRTNASKADVIQVRPL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggggaaccgcagcggcggccagggatattgggaggacgggacaggcgccgag
ggcgcagcgcctgcgggtacactgagccccgcgccgctcttcagccccacggcgtacgag
cgcctggcgctgctgctcggcggcctcgcgctgctgggcgtcggcggcaacctgctggtg
ctgctgctctactccaagtttccgcggctgcgcacgcccacccacctcttcctggtcaac
ctcagcctgggcgacctgctggtgtccctgttcggcgtcaccttcaccttcgcgtcgtgc
ctgcggaacggctgggtgtgggacgctgtgggctgcgcgtgggacgggtttagcggcagc
ctcttcgggtttgtctccattaccaccctcgccgtgctggcctatgaacgttatatccgt
gtggtacattccagagtgatcaatttttcctgggcctggagggccattacctatatctgg
ctctactccttggcatgggcaggagcacctctcctgggctggaacagatacatcctggac
gtacatggactgggctgtacagtggattggaaatccaaggatgccaacgactcctccttc
gtgctcttcttgtttcttggctgcctggcggtacccatgggcatcataggccattgctat
ggtcacattctgtactccgttcgaatgctacgctgtgtcaaagatctccagacaatccaa
gtgatcaagattttaagatatgaaaagaaagtggccaaaatgtgctttttgatggccttt
gtctttctcacctgctggatgccttatattgtgacccgcttcttggtggttaatggctac
ggacacctggtcactccaactgtgtctattgttgcttatctctttgctaaatcgagcact
gtgtacaatccagttatctatatcttcatgatgagaaagtttcggaggtcccttctacag
ctcctatgcttccgactgctgagatgccagcggcctgctaaaaacctgccagcagctgag
agcgagatgcagatcaggcccatcgtgatgtcacagaaagatggagacaggccgaagaag
aaagtgacctttaactcctcttccatcatctttatcatcaccagtgatgactccctgtct
gtcgatgacagcgacagaaccaatgcgtccaaggccgatgtcatccaagttcgtcctttg
taa
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