Chionomys nivalis (European snow vole): 130875016
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Entry
130875016 CDS
T11437
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03013
Nucleocytoplasmic transport
cnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130875016
03015 mRNA surveillance pathway
130875016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130875016
03036 Chromosome and associated proteins [BR:
cnl03036
]
130875016
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130875016
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130875016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
130875016
NCBI-ProteinID:
XP_057626613
LinkDB
All DBs
Position
5:56542307..56542828
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AA seq
171 aa
AA seq
DB search
MLAAGVGGQGQRLSGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLWVFTTNNGRHH
RMDEFSHGNVPSSKLQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGY
RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPSGRMRPY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctgcaggggtcggaggtcagggccagcgtctctcgggccgaaggaggaagatg
gcggtggaatcgcgcgttacccaggaggagattaagaaggagcccgagaagccgatcgac
cgcgagaagacctgcccgctcctgctgtgggtcttcaccaccaacaacggccgccaccac
cgcatggacgagttctcccacgggaacgtgccctcgagcaagctgcagatctacacctgg
atggatgcaaccttgaaagaactgactagtttagtaaaggaagtctacccagaagccaga
aagaagggcacacacttcaattttgcaattgtttttatggatcttaaaagacctggatat
agagttaaggagattggcagcaccatgtctggcaggaagggcaccgatgactccatgacc
ctgcagtcacagaagttccaaataggggattatctggacatagccatcactcctccaaat
cgggcccctccttcaggacggatgagaccatactaa
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