Chionomys nivalis (European snow vole): 130875458
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Entry
130875458 CDS
T11437
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04517
IgSF CAM signaling
cnl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130875458 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130875458 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnl04812
]
130875458 (Sptbn1)
Cytoskeleton proteins [BR:
cnl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130875458 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
130875458 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130875458
NCBI-ProteinID:
XP_057627265
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All DBs
Position
6:13511609..13681232
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSAHFEQAIKEGEDMIAEEHFGSEKIRERIT
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKISAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVREKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLTDLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRGLVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
KQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQWDTSKGDQVSQNGLPAEQGSPRMAETMDTSEMVNGAAEQRTSS
KESSPIPSPTSDRKAKSALPAQSAATLPARTQETAAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtggccacagactatgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaacgagaacagctccgcacggctcttc
gagcggtcccgtatcaaggctctggcagatgagcgtgaagctgtacagaagaagaccttc
accaagtgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacacc
gacctccgagatggacggatgctcatcaagctgctggaggtcctctccggagagaggctg
cctaaacccacgaagggacggatgcgcatccactgtctggagaatgtagacaaggctctt
cagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtggagactgaagataacaaagagaaaaagtctgccaaggatgctctgctg
ctgtggtgccagatgaagacagctgggtacccaaatgtcaacattcacaacttcaccacg
agctggagggatggtatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaacctgcaaaatgcatttaacctg
gcagagcagcaccttggcctcactaagctgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtctatcatcacctatgtggtgacctactaccactacttctccaagatg
aaggccttggctgtggaaggaaagcggattgggaaggtgctcgacaatgctattgagaca
gagaaaatgattgagaagtatgagtcactagcctctgaccttctggagtggattgagcaa
accatcatcattctgaacaatcgcaagtttgctaattccctagttggggtccagcagcag
cttcaggcgttcaacacttaccgcacagtggagaaaccacctaagttcaccgagaagggc
aacttggaggtgctgcttttcacaattcagagcaagatgagagctaacaatcagaaggtc
tacatgccccgggaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagcgagaactggccctgcggaatgagctcataaggcaggaaaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacgtggctgagcgaa
aaccagcgactggtgtctcaggacaactttggatttgaccttcctgcagttgaggccgcc
accaaaaagcacgaggccattgagacagacattgctgcatatgaagagcgtgtccaggct
gtggtggccgtggccagggaacttgaagcagagaactaccatgacatcaagcgcattacg
gcgaggaaggacaatgtcatccggctctgggaatacttgctggaattgctcagggccagg
aggcagcgtcttgagatgaacctggggctgcaaaagatattccaggaaatgctttacatt
atggactggatggacgaaatgaaggtgctattgctgtcccaagactacggcaaacacttg
cttggtgtagaggacttgttacagaagcatgccctggttgaagccgacattgcaatccaa
gcagagcgggtaagaggtgtgaacgcctctgcccagaagtttgcaacagatggggaaggc
tacaagccctgcgacccccaggtcatccgagaccgcgttgcccacatggagttctgctat
caagagctttgtcagctggcagcggaacgtagggcccgcctggaagagtcccgtcgcctc
tggaagtttttctgggagatggcggaagaggaaggctggattcgggagaaggagaaaatc
ttgtcctccgatgattacgggaaagacctgaccagtgtcatgcgcctgctgagcaagcac
cgggcgtttgaggatgagatgagtggccgtagtgcccacttcgagcaggctatcaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagatccgcgaaagaatcact
tacatccgggaacagtgggccaacctggagcagctctcagccattcggaagaagcgcctt
gaggaggcctccttactgcaccagttccaggctgatgctgacgacatcgatgcctggatg
ctagacatcctcaagatcgtctccagcaacgacgtgggccatgacgagtactccacacag
tctctggtcaagaagcataaagatgtggcggaagagatcaccaactacaggcccactatt
gacaccctgcatgagcaagccagtgcccttcctcaagcacacgcagagtctccagatgtg
aggggtcgtctggccggcatcgaggagcgctacaaggaggtggcagagctgacacggcta
aggaagcaggctctgcaagataccctggccctgtacaagatgttcagtgaggccgatgcc
tgcgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaagtcatccagcacaggtttgagagcctagaacctgaaatgaacaac
caggcttcccgggttgctgtggtaaaccagattgcacggcagctgatgcacagtggccac
cccagtgaaaaggagatcagagcccagcaggacaaactcaacacgaggtggagccagttc
cgagagctggtggacaggaaaaaggatgccctgctgtctgccctgagcatccagaactac
cacctcgagtgcaatgagaccaagtcctggatccgggaaaagaccaaggtcattgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgaccggc
atggaacgagacttggtggccattgaggcgaaactgagcgacctgcagaaagaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agcgatgtgtgggaggagatgaagacgaccctgaagaaccgagaggcctccctgggagag
gccagcaaactgcagcagttcctgagggacttggatgacttccagtcttggctgtccagg
acccagactgccatcgcctcagaggacatgcccaacaccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaatgagattgacaattatgaggaggactaccagaag
atgcgggacatgggtgagatggtcacgcagggacagactgatgctcagtacatgtttctg
cgacagcggctgcaggccttagacacgggctggaacgagcttcataagatgtgggagaac
agacagaaccttctctcccagtcccacgcctaccagcagttcctccgggacaccaaacaa
gccgaggctttcctcaataaccaggagtatgttttggctcataccgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaagcaggaggacttcatgaccaccatggacgcc
aacgaggagaagatcagcgctgtggtagagacgggccggaggctggtgagcgatggcaac
atcagctcggatcgcatccaggagaaggtggactctattgatgacagacacaggaagaat
agagaggcagccagtgaacttctgatgaggttaaaggacaaccgagacctacagaaattc
ctgcaagattgtcaagagctgtccctctggatcaatgagaagatgctgactgcccaggac
atgtcttatgatgaagccagaaacctgcatagtaaatggttaaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagagaagccagaaacagaagctgtggtgagggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctcttcgatgcaaat
aaggctgagctcttcacacagagctgtgcagatctagacaaatggctccatggcttggag
agccagatccagtctgacgactacggcaaagaccttaccagtgtcaatattctgttgaaa
aagcaacagatgctggagaatcagatggaagtgcggaagaaggagatcgaggagctccag
agccaagcgcaggcactgagccaggaggggaagagcactgatgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggagctcttggagcccttgaatgagaggaagcacaat
ctgttagcctccaaagagatccaccaattcaacagggatgtggaggacgagatcctgtgg
gttggtgagaggatgcctttggccacgtccacagatcatggccataaccttcaaactgtg
cagctgttgataaagaaaaaccagaccctccagaaagaaatccaaggacaccagcctcgt
attgatgatatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgct
gaggctatcaggcagagactcaccgacctgaagcaactgtgggggctcctcattgaggag
acggagaaacgccatagacggctcgaggaggcacacaaagcccagcagtactactttgat
gcagctgaagccgaggcttggatgagcgaacaggaactgtacatgatgtccgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaaaaagcatcagattttggaacaagct
gttgaagactatgcagagacagtacaccagctctccaagactagccggggcctggtggct
gacagccatcccgaaagcgagcgtattagcatgcggcagtcaaaagtggacaagctgtat
gccggcctgaaggaccttgctgaagaaaggagaggaaaacttgacgagaggcacaggctc
ttccagctcaacagggaggtcgacgacctggaacagtggattgctgagagggaagtggtc
gcagggtcacatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacactgggaacattgggcaggagcgcgtggatacagtcaatcat
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gacggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
ctcgctgcctcctacgaactgcataagttttaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacactgtggag
accttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcaggtg
aagcagctgcaggaggacgcagcccgcctacaggcagcctatgcaggggacaaggctgat
gacatccagaaacgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggccgcagggtgcggctggtggacacgggagacaagttccgcttcttcagcatggtc
cgggacctcatgctctggatggaagatgtcatccggcagatcgaggctcaggagaaacca
cgggatgtgtcctctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagtttcacaacttgcattgaacttgggaaatccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacagaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggagtggctaagactgattttggaggtccat
cagttctcaagggatgccagtgtggctgaggcttggctgctcggacaggaaccataccta
tccagccgcgaaattggccagagcgtggatgaagtggagaaactgatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggatgagagattctccgccctggaaagactgaca
acattggagttactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcggccg
ccttctccggagccaagcacgaaggtttcagaggaggctgagtcccagcaatgggatact
tcaaaaggagaccaagtttcccagaatggtttgccagctgaacagggatctccacggatg
gcagaaaccatggacacaagtgaaatggtcaacggtgctgccgagcagaggacaagctcc
aaagagtccagtcccattccctctcccacctctgaccgcaaggccaaatctgcacttccg
gcccagagtgctgccaccctgccagccaggacccaagagacagcagcggcccagatggaa
ggcttcctcaatcggaagcatgagtgggaggcccacaataagaaggcctcgagcaggtcc
tggcacaatgtttattgcgtcataaataaccaggaaatgggcttctataaagacgccaag
agtgctgcttccggcatcccctaccacagtgaggtccctgtgagtttgaaggaggctgtc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaatgat
ggcaatgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggcc
atttcctccgccatctcctccgacaaacacgacctgtccgccagcacccagagtacgcca
gcatccagccgggcgcagaccttacccaccagcgttgtcaccatcaccagcgagtctagt
cccggcaagagggagaaggacaaagagaaagacaaagagaagaggttcagccttttcggc
aaaaagaagtga
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integrated database retrieval system
