Chionomys nivalis (European snow vole): 130875554
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Entry
130875554 CDS
T11437
Symbol
Dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130875554 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130875554 (Dhx15)
03009 Ribosome biogenesis [BR:
cnl03009
]
130875554 (Dhx15)
Enzymes [BR:
cnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130875554 (Dhx15)
Spliceosome [BR:
cnl03041
]
Complex A
U2 snRNP components
U2 related factors
130875554 (Dhx15)
Complex B
130875554 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130875554 (Dhx15)
Ribosome biogenesis [BR:
cnl03009
]
Eukaryotic type
90S particles
Helicases
130875554 (Dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
AAA_29
Cas3-like_C_2
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
130875554
NCBI-ProteinID:
XP_057627531
LinkDB
All DBs
Position
6
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgtttggaccttggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggatagagatcgtgatagagaagaccgatctaaagatcgt
gaccgagaacgcgatagaggagatagagagcgggagagggaaaaagagaaagaaaaggaa
ttgagagcttccaccaatgctatgcttatcagtgctggattgccgcctttaaaagcttct
cattccgctcattcaacccactcagctcattcaacacattctacacattctgcccattca
acacacaccggacatgcaggacacacatcacttccacagtgcattaatccatttaccaac
ctgccccatacgcctcgatattatgatattctaaagaaacggcttcagctccctgtttgg
gaatacaaggataggtttacagatattcttgttagacatcagtcattcgtacttgttggt
gagactgggtctggtaagacaacacagataccacagtggtgtgtggagtatatgcgatca
ttgccaggacccaaaagaggagttgcctgtacacagcccagaagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ctacttcgtgaagccatgaatgatcccctcctggagcgttatggtgtgataattcttgat
gaggctcatgaaagaacattagctacagacattctcatgggtgttttgaaggaagttgta
agacaaagatcagatttaaaggttatagttatgagtgctaccctagatgctgggaaattc
cagatttactttgacaactgtcctctcttaactattcctggccgaacacatcctgttgag
attttttatactcctgaaccagagagagattatcttgaagcagcaattcgaacagtgatc
cagatacatatgtgtgaagaggaggaaggagaccttcttcttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccccgaagtt
ggagatattaaaatcattccattgtattctacacttccaccccagcagcagcaacgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaacattgcagagacctctttgacaatagatggtgtggtgtttgtgattgaccctgga
tttgcaaagcaaaaggtatataatcctagaatcagagttgagtctctcttggtgacggca
attagtaaagcttcagctcagcaaagggccggtcgagctggacgcaccagacctgggaaa
tgctttcgactttacacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattttgcgctctaatttaggatcagttgtattacaattgaagaagcttggtattgat
gatttggtacattttgattttatggacccaccagctcctgaaactctgatgagagcccta
gaacttctgaattacttggctgctttaaatgatgatggagatctaactgaattgggatcc
atgatggcagagtttcctctagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgctgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtcgctgatgtctgcagacaatgta
cgccagcagctttcaagaattatggacagatttaatttgccccgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcattggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcccgaatgggtgctttacaatgagtttgtg
ctgacaacaaagaattacatccggacatgtacagacatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcagtccaaggaatattcacagtactga
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