Chionomys nivalis (European snow vole): 130876295
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Entry
130876295 CDS
T11437
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130876295 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130876295 (Fip1l1)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130876295 (Fip1l1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
130876295
NCBI-ProteinID:
XP_057628806
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Position
6:75198612..75261307
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AA seq
604 aa
AA seq
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MSAGEVERLVELSSGTGGDEEEEWLYGGPWDVHVHSDLTKDLDENEVERPEEENASANPP
AGIEEEAAENGVSKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSAANKITAEDCTVEVTPGAESQDDRVNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYGR
AESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFFP
PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGH
SSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRERDRDRE
RDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVPEQESAEA
APAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggagcgcctggtggagctgagcagcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccctgggacgtgcatgtgcacagtgatttgacaaag
gatctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcctcca
gctggaattgaagaggaagctgctgaaaatggcgtgtcaaaaccgaaagtgactgagaca
gaagatgatagtgacagtgacagtgacgatgatgaggatgatgttcatgtcactatagga
gacattaaaactggagcaccacagtatgggagttatggaacagcgccagtaaatcttaat
atcaaggcagggggaagagtgtatggaaatacaggaaccaaagtcaaaggggtagacctt
gatgcacctggcagcattaatggagtgccactcttagaagtagatttggattcttttgaa
gataaaccatggcggaaacctggtgctgatctttctgattattttaattacggctttaat
gaagatacttggaaagcttactgtgagaaacaaaagaggatccgaatgggacttgaagtt
ataccagttacttcagcagcaaataagatcacggccgaagactgtactgtggaagtcaca
ccaggtgcagagagccaagatgacagagtcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaagaagcagcacttccatctacaaaagctgagtttacttctccgcca
tcattgttcaagacgggcctgccaccaagcagaaacagcacctcttctcagtctcagaca
agtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatatgggagg
gccgagtcacctgatctaaggagattgcctggtgcaattgatgtcattggtcaaacaata
accatcagccgagtagaaggaagacggcgggcaaacgaaaacagcaatatacaggtcctt
tctgacagatctgctactgaagtggacaacaatttcagcaaaccacctccatttttcccg
ccaggggctcctcctactcaccttccaccgcctccatttcttccacctcctccaactgtc
agcacggctcctcctctgatcccacctccaggtattccaataactgtaccacctccaggt
ttccctcctccaccaggtgctccacctccatctcttataccaacaatagaaagtggtcat
tcctctggttatgacagccgttctgcacgggcgtttccatacggcaatgttgccttcccc
catcttaccagttccgctccctcatggcctagccttgtggacaccaccaagcagtgggac
tattatgcacgaagagagaaagaccgagatcgagaccgagagagagacagagaccgagag
agagacagagaccgggacagagaaagagagcgcacccgagagagggagcgagagcgggat
cacagccccacccctagtgttttcaacagtgatgaggagcggtacagatacagggagtat
gcagaaagaggctatgagcgccatagagctagtcgggaaaaagaagagcgacacagagag
cgacgtcacagagagaaagaggaaaccagacacaagtcctctcgcagtaacagtagacgt
cgccatgaaagtgaagaaggggacagtcacaggagacacaagcacaaaaaatctaaaaga
agcaaagaaggaaaagaggctggcagtgagcccgtccctgaacaggagagtgctgaagct
gcccctgctgagtag
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