Chionomys nivalis (European snow vole): 130876326
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Entry
130876326 CDS
T11437
Symbol
Pkd1l1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
cnl Chionomys nivalis (European snow vole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PKD_4
PLAT
GPS
PKD_channel
At4g37920_M
Motif
Other DBs
NCBI-GeneID:
130876326
NCBI-ProteinID:
XP_057628839
LinkDB
All DBs
Position
6
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AA seq
2587 aa
AA seq
DB search
MSLPSVMIRSTGNSASPRFCLQWLCQAERADASFSGLQQGALCSPKKGVLCCGELLRSVE
DLSKKLLLRSVTXEVPTRVVTAPHSSETPPGIACTCSLPTSWYHPESPSPLSQHPTGPNP
AMQPENTGHFAINCFPDTDAQALPALGIRVHPASGTLLRLLVDFGDGCGAEMRLCTMTGA
AAVTSCHRYRKEGVYKLRAVVHDVHGADVELGPYYVNTGHENVSVFMNSSSIHEGEALSL
ANSLLQQKGTVVMHGFSSVSSYNVSFVSQPPVGSCQAWLGVTVGYKMQSVSIYTNGTVFA
ADTDITFVAVTKETIPLEFVWYFGDDPPMRTTSRSLRRRLSIPQRYHVMVEAISRIGSVV
SESHLISVQKRITANGLMSPASALVNANVSFECRLNFGTDVAYLWNFGDGTTEVGRSSFS
HVYSREGEFTVEVLAFNNISSAVLRKPLFIVHEPCQPPPVKNMGPKKVQIWRAQPLRLAV
TLEAAVLCNISQGLSYTWTIVDAEATAITLPAAVNTLGQTIELPSYTLECGNYTATAKVQ
IKGSMVYSNYSVGVEVRARAPVSVISEGTHIFIPRATTASIILRGFQSYDPDNPGAALRY
HWTCTAASSPRWPCFEDSTPYQVDTQAPAVSFPAKWLSGCCDQFLVTLIVSSNGQNSSQA
LIFLSTRSDPDFRFVHISWVNFRDIRVNWNEELSLRAVCEDCDDIPDLTYSWDLFLVNAT
EKSTVEVPFCSTVGLLGASASGAILKLSQSSPRGSLTRHSQEQSPMPPSWTALRNLGSIS
SESTAGGHHIPAAMGPMAGSGGAMEDSSSLSPVPGSLDEEALVMSTPEGSWPPSISSPAF
DDFEAYYSDIQEDVPSSGRQPGTSTNFQESGPSMNTEESASDGDNLLGPFLHTGRAKPAL
MIDWPKALVSRAVFQSYTSSGIMGPDVTIRPFSLSSGEMYVLQASVASKKALLGKAQLYI
TVNQVPQDMSCQVRPHSGMEAHTLFSVFCMSGKPDFHYEFRYRVGNTSHTLYSGQDTQYY
FLLPAGETSDNYKVIVSTEITDGQGSKVQPCSVEVTVLPRYHGNDCPDKDLYDSTMDTLS
SLQLVGSYTEIRNYIAMTTVILSRLYVESRNKSSCGLWSQIQDVLISSACRVPLTDQEAM
VDSIHILRNLISVPNKLSSMSAVHILECAQMLLAQGPFSRKLLVNKNLGVELILLISGVW
EAAKEDRRKENSLQEEGMKIISDMLLTCLSLSHQPQLHISAGQMEFWTLLHHSFQKSSQN
LGFIWVHFPGNLVLRHSAQEASQSPCYISHLMLFMNSPYPEGQAPGQVGSVVSPRLYSCK
SRSPILRGRLETPVTVEFGEEDYLVKTKHPTVFTLLRDEVNLHQFTGLSEKPQETLQIRI
KFLKPRRRAFPVMLLVRFSKKATPSHFLVKQVYFWDEQTVQIYVPTVPWKGADVGYLSLL
DADYDRRPPNKYLAGAVNYTVHFQRIQCVFWDKTEWRPEGNSPQPGTSPERVNCSYHRLA
PFSVLRRKLNATFEVSSISEFWSDPHNLLPGIFSVFLLVLHGILVTKSRCIGCHKKRKPG
CIFLEGDTVPGHQLYAVIVDTGFRSPAQFTSRVFIVLCGENGLSETKELCCPQMSLFGRN
SRHTFILSTPNQLGPLQKIRLWHDSSGPSPNWFVSHVMVKELHSGQGWFFSAQCWLAVSL
CDGRVQRELFCLRHGLGFWKLFYAKFTEYLEDFHIWLSLYSQPPSSSYLHTQRLAVAFCL
LCVYSCLTALVTVGVHEQRPLDVGPTLESFCLGLLCTFLACPATQILSLLFRFSKEAAEH
LPGAPQWPLRGVKTEVPQAPSGGFEGLVPQWSRVCLRWSSSVVWAICGLASLACGLGTGF
LGYRFVPEQCIRWLYLLLLSVVCCVFVTQPLMICLAALAFAWKKKHDSQFFTESLRDATK
DLDLKLEEYSRTHLPPSPSSHSPDSAEEAERVLAARQRDRRLRWAQPPSRAKFREIKEKL
RKENRMQAALRGISTHSLVLLLLLFITYGRVCPGEYSLNHAIRKAFTRNARHSFGDLNST
DDWWDWTLSMLLDGLHPEGPSAGTPGAQPGALGGQCHLIGPAVIRQLMVSSGTACAPARP
VSEPMEDALPTLSRDLDLENLKVTPSGPETCGAMKKISMYSLGRTRHEVHVALTALRTSR
WVDHSTRAVSVHFTLYNPPTRLFTSVTLGAELLPTGGLVPSSLVESISIYGDSAPRYLLV
LSELAFLVLNVTHLCFQLWGMATKGVLSYWRKPRHWLELSTVGVALAYHAASGHLTSLAE
NVTDQFRKGLHQMFVDLSLMVSWNQRVRWLRGSLLFLWMLKCAHLLGLLSTRAAFSAVMC
SSLSRALAPALLGALSLAAYSHLCLFLLFTWMPSPDTSTDAFPELLLQFLGRNQKDSLRN
CLESGRRAVACYCGALFLLVAALCFGMLKASLLTFFRKSKSSQRKSHVTLRNVAVYAWHK
VLAILGRETTLEETEVATDQNYYLDEFSSLLDELLVKIDGLSDSLELSSLENQWRRTVES
RTGESPLVGIPGYHATVLPPPTVKGKFLLHFLLWSRALATQCGPSLQMLARPESTAAIGR
CYGGFAP
NT seq
7764 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccttctgtcatgatcaggagcaccgggaacagcgccagtccccgcttctgt
ctccagtggctgtgtcaggctgaaagagcagatgcatcgttctctggtctgcagcagggc
gccctctgcagtccgaagaagggagttctttgctgcggagaactgctgcgctctgtggaa
gacctgtccaagaagctgcttctgaggtctgtcaccnaggaggtccccaccagggtggtc
acagccccacattcctcagagactcctcctggcatcgcttgcacctgcagcctccccaca
tcctggtaccatcccgagagtccctctcccctcagccagcatcctactgggcccaaccca
gcgatgcagcctgaaaacaccgggcactttgccatcaactgcttcccagacacagacgct
caggcgcttccagctctgggaatccgtgtccaccctgcttccggaacacttcttcgtctg
ctggtggactttggggacggttgcggagctgagatgagactgtgtacaatgacaggcgca
gctgcagtgactagctgccaccggtacagaaaagaaggagtctacaagctcagggctgtt
gtgcatgacgttcacggagctgatgtggaactggggccatactacgtgaacactggccat
gagaacgtgtctgtattcatgaactccagctctatccacgagggtgaagccctctccttg
gccaactctctcctacagcagaaaggcacagttgtgatgcatggcttttcatctgtgtcc
tcatacaacgtgtcctttgtttctcagcccccagtgggcagctgccaggcttggcttggt
gtgactgtcgggtataagatgcagtctgtgtccatctacaccaacggaactgtgtttgct
gcagacacagacatcacatttgtggctgttaccaaggaaactatacccctggagtttgta
tggtattttggagatgacccccccatgaggacaacttccagaagccttagaagaaggctg
agcatccctcagcggtaccacgtgatggtcgaggccatcagcaggatcggcagtgtagtc
tctgagtcccacctcatcagcgtacagaagagaatcacagccaatgggctcatgtccccg
gcctcagccctggtaaatgccaacgtgtcctttgagtgcaggctcaactttggcacggat
gtagcctatctttggaactttggagatggtaccaccgaggtgggcagaagctccttcagc
catgtttacagcagggagggtgagtttacagttgaagtcctggccttcaataacatcagc
tccgccgtcctaaggaagccgcttttcatcgtgcatgagccttgccagccacctccggtg
aagaacatggggcctaagaaggtgcagatatggcgcgctcagcccctgagactagcagtg
acactggaagctgcagtcctctgtaacatttcccaagggctttcctacacctggaccatt
gtggatgctgaggcgaccgccatcaccctccctgcagctgtcaacaccctcgggcaaacc
atcgagctccccagctacaccctggagtgtgggaactacactgccacggctaaggttcag
atcaagggaagtatggtgtatagcaactacagtgttggtgtggaggttcgagccagggct
cccgtcagcgtgatctctgaaggcacccacatcttcatccccagggccaccacggcctcc
atcatcctcagaggcttccagtcctacgaccctgacaatcctggagcggctctcaggtat
cactggacttgcacggcagccagctcaccaaggtggccctgctttgaggactctactcca
taccaagtagacactcaggctcctgccgtttccttcccagcaaaatggctcagtgggtgc
tgtgaccagttccttgtgaccctgatagtctccagcaatgggcagaactcttctcaggcc
ttgatattcctgtccacccgttcagacccggacttcagattcgtccacatctcgtgggtc
aactttagagacatccgtgtaaactggaatgaagaactgtctctccgagctgtgtgtgaa
gactgtgacgatatacccgacctcacttattcctgggatctcttcctggtcaacgcgaca
gaaaagagtaccgtggaagtccccttctgcagcaccgtggggttactgggcgcttcagca
tccggggccattctgaagttgtctcagtcaagcccaagaggatccctgacacgacactca
caagagcagtcacccatgcccccgagctggacagctcttcgcaacctgggaagcatttcc
tctgagtccacagcaggaggacaccacattcctgcagcgatgggtcccatggcaggctcc
gggggggccatggaggactccagctcattgagtccagtaccaggttccctggatgaagaa
gctttggtgatgagcaccccagaaggaagctggcctccttctatttcctcccctgccttt
gacgactttgaagcctattatagtgacatccaagaagacgtgccatcttccggaagacag
ccagggaccagtaccaacttccaggaatcaggaccaagcatgaataccgaggagagtgcc
agtgatggggacaacctgctgggccctttcctccacacaggcagagcaaagccagctctc
atgattgactggcccaaggccctggtcagccgagctgtcttccagagctacacctcctca
ggtatcatgggaccggatgtgacaataagaccgttctcactgagcagtggcgagatgtat
gtcttgcaggcttctgtagcttcaaagaaggctttactaggcaaagctcagctctacata
acggtcaaccaggttccacaggacatgtcctgtcaggtgcgaccccacagtggtatggag
gcacataccctcttcagtgtcttctgcatgtcagggaaaccggacttccattatgaattt
cgctaccgggtaggaaacacttcacacaccctgtacagcggacaagatacccagtactac
tttctgttgccggctggtgagacctcagacaattacaaagtcattgtttctactgagatc
acagatggccaaggctccaaggtgcagccatgcagtgtggaagtgaccgtgctaccccgt
taccatggaaatgactgccctgacaaggacctatacgactccaccatggacaccctctct
tctctccagctggtgggaagttacacggaaataaggaactacatcgccatgaccactgtg
atcctgagccgtttgtatgtggagagcagaaacaagtcttcctgtggcctatggtcacag
atacaggatgtattgatttcttcagcatgcagagtacctttaacggaccaggaagcgatg
gtggactctattcatattctgagaaacctcataagtgtccctaataagttgagctccatg
agtgctgtgcacatccttgaatgtgcacagatgctcctggcccaaggtccgttctccagg
aaattgctggtcaacaaaaacctgggagttgagcttatccttctcatctctggagtctgg
gaagctgccaaagaagacaggagaaaggagaactctctgcaggaagaaggcatgaagatc
atctctgacatgttactaacctgtctctccttgagccaccaacctcaacttcacataagc
gctgggcagatggagttctggacccttctccatcacagcttccagaagtctagtcagaac
ctgggcttcatctgggtccatttccctggcaacctggtcttgcgccattctgctcaagag
gcatcccaaagcccatgctacatcagccacctcatgctcttcatgaatagcccttaccca
gagggacaagctcctggacaggtgggcagcgtggtgagccctagactctacagctgcaag
agcagaagccccattctcagaggacggctggagacacccgtgaccgtggagtttggggag
gaagactacctggtaaagacaaaacatccaaccgtgttcaccttgcttcgggatgaggtg
aacctccaccagttcactgggctttctgaaaaaccccaggaaaccttacagatacgcatc
aaattcttgaagcccagaagaagagccttccccgtcatgctgctagtaaggttctccaag
aaggccacgccttcgcattttcttgtgaagcaggtgtacttctgggatgagcagactgtg
caaatttatgtacctactgtcccatggaaaggagccgatgtagggtatttgtccctgtta
gacgctgattatgacaggagacctccaaacaaatatcttgccggagcagtaaactacaca
gtgcatttccagcggatccagtgtgtgttttgggacaagacagagtggagacccgaaggt
aactctccgcagcccggaacttctcctgagagagtcaactgtagctaccatcgcctggcg
cctttctctgtcctcagaagaaaactgaatgccacttttgaagtaagcagcatttctgag
ttctggagtgacccacataatttgcttcccgggattttcagtgtgtttctcttggttctt
catggaattctggtgactaaaagcagatgtataggttgtcacaagaaaaggaaacctggc
tgtatttttctggaaggagacaccgtgcctggccaccagctgtatgcagtcatcgttgac
actggcttccggtcaccagcccaatttacatcaagggttttcattgttttatgtggtgaa
aatggactctcagaaaccaaagaactctgctgcccacagatgtccttatttggaaggaat
tccaggcacacctttatactgagcactcctaaccaactgggcccactccagaaaattcgc
ctgtggcacgacagtagtggaccatccccaaactggtttgtaagtcacgtgatggtgaag
gagctacactcaggccaaggctggttcttctctgcccagtgctggctggctgtgagccta
tgcgacggccgtgtgcagcgagagctcttctgcctgcgccatggtcttggcttctggaag
cttttctatgccaagttcacagagtacctggaggatttccacatttggctctcactgtac
agccagcccccctccagcagctacctgcacacacagcgacttgccgtggccttctgtctc
ctgtgtgtctattcgtgcctcactgccctggtcactgtgggagtccatgaacagcgcccg
ctggatgtgggtcccactctggaatccttctgcctgggtctcctgtgcacctttctggcc
tgtccagctacccagatattgtcactgctcttcaggttcagcaaggaagctgcagagcat
cttccgggtgcaccacagtggcctctaagaggagtgaagacagaggtacctcaggctccc
agcggtggttttgaagggcttgtgccccagtggtcaagggtctgtctgcgctggtcaagc
tctgtggtctgggccatttgtgggttggcgtccctggcctgtggtttggggacaggattc
ctaggctacaggtttgtgccagagcagtgtatacggtggctgtacctgctgcttctttct
gtggtctgctgcgtatttgtcacccagccactaatgatctgtttggcagcgctcgccttt
gcttggaaaaagaaacacgacagccagttttttactgagtctttacgtgatgcaaccaag
gatctagacttgaaattggaagaatactccagaacccaccttcctccttctcccagctcc
catagtcctgacagtgctgaggaggccgaaagggtcttggctgcacgacaaagagaccgc
cgcctgcgctgggctcagccaccatccagggccaagttcagagagatcaaggagaaactg
aggaaagagaaccggatgcaggcagcactgagaggcatttccacgcacagtctcgtgctg
ctgctgcttttgtttataacatatgggagagtctgcccgggtgaatattctctcaaccat
gccatcaggaaggcatttacaagaaatgccagacactcctttggggacctgaacagcaca
gacgactggtgggactggactctgagcatgttgctggatgggctgcacccagaaggaccc
tctgctgggaccccgggggctcagcctggagctctcggagggcagtgccacctcataggc
cctgcggtgatcaggcagctcatggtttcttctggtactgcatgcgcgcctgccagacca
gtctcagagcccatggaagatgcactacctacactgagtcgcgaccttgaccttgagaac
ctaaaagtgacccctagtggtcctgagacctgtggggcgatgaagaagatctccatgtac
agcctagggagaacaaggcatgaagtccacgtagccctgactgccctcaggaccagtagg
tgggtggaccacagcaccagggctgtgtctgtgcacttcactctctacaaccctcccacg
cgactcttcaccagtgtgaccctaggtgcagagcttctccccacgggaggtcttgtcccc
tcatccctggttgagtcaatcagcatctacggtgactcagccccacgctaccttcttgtg
ctttctgagctggcgttcctagttctcaacgtgacccacctctgtttccagctctgggga
atggccaccaagggtgtcctcagctactggaggaaaccaagacactggctggagctctct
acggttggggtagccctggcctaccatgcagcctctggtcacctcactagccttgctgag
aatgtcactgaccagttccgcaaaggacttcaccagatgtttgtggacctaagtctgatg
gtgtcatggaatcagagggtaagatggctccggggaagcctgctgttcctctggatgttg
aaatgtgctcacctcctcggcctcctaagcaccagggcagccttctctgcagtgatgtgt
tcgtctctctccagagccctggcacccgcactgttaggggccctgtcgctggctgcctat
tcccacttgtgcctgtttctgctcttcacctggatgccatcacccgacacctctacagac
gcatttcctgagctgctgcttcagtttctgggaagaaaccaaaaggactcactgcgcaat
tgcttggagtctgggcgtcgagccgtggcttgttactgtggggccctgtttctgctggtg
gccgctctgtgttttggaatgctgaaggcgtccctcctgacttttttccgaaaaagtaag
tcttctcaaagaaaatctcatgtgacacttagaaatgttgctgtttatgcatggcataaa
gtcctcgccattctggggcgggaaacaactcttgaggagactgaggtggctacggatcag
aattattacctggatgaattttcaagtctattggatgaacttctggtaaagattgatggt
ttgtctgacagcctagaactctctagcctagaaaaccagtggaggaggacagtggagtca
aggacaggggagagtcctctcgttggcattccagggtaccatgctactgtgctacctcca
cctacagtcaaaggaaagttcctgcttcacttcttgttgtggtccagggccctcgccact
cagtgtggcccttctctgcagatgctagccaggcctgagtccacagcggcaattgggaga
tgctatggggggtttgccccataa
DBGET
integrated database retrieval system
