Chionomys nivalis (European snow vole): 130876353
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Entry
130876353 CDS
T11437
Symbol
Cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04022
cGMP-PKG signaling pathway
cnl04024
cAMP signaling pathway
cnl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
130876353 (Cnga1)
04022 cGMP-PKG signaling pathway
130876353 (Cnga1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130876353 (Cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnl04040
]
130876353 (Cnga1)
Ion channels [BR:
cnl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130876353 (Cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
MCU
Tim54
Ion_trans_2
FancD2
Zip
SLC52_ribofla_tr
GrpE
NPR3
Ndc1_Nup
CDC45
RR_TM4-6
CIS_TMP
DDHD
RNA_pol_Rpc4
Sec62
Motif
Other DBs
NCBI-GeneID:
130876353
NCBI-ProteinID:
XP_057628855
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All DBs
Position
6:complement(73335126..73348575)
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AA seq
683 aa
AA seq
DB search
MKTNIINTWQSFVRIPNAVVPATGQEIRRMENGACSSFSDDDNASLSEAESEDSFFSNGS
QRRRGPSQREQYLPGTMALFNVNNSSNKNQDPKEKKKKKKEKKSKADDKNENKKDPEKKK
KKEKEKEKKKKEEKDKDKKEEEKKEVVIIDPSGNTYYNWLLCITLPVMYNWTMIIARACF
DELQSDYIEYWLIFDYVSDIIYVVDMFVRTRTGYLEQGLLVKDKLKLIEKYKANLQFKLD
VLSMVPTDLLYFKMGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVI
IIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPP
VLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARVDAIKQYMNFRNVSKD
MEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLV
ELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISI
LNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLL
DLNIANLGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKKRLTKVERFLKPL
IETEFSALEEPGGESEHAESAWD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatattatcaacacgtggcagtcctttgtaagaatccccaatgcggtcgtc
cccgctactggacaggaaatccggcggatggaaaacggagcgtgcagctccttttctgat
gacgacaatgcctctctgtctgaagcagagagtgaggactctttctttagtaacggctca
caaagaaggcgaggaccatcccagagggagcagtacttgccaggcactatggctcttttc
aatgttaacaatagcagcaacaaaaaccaagacccaaaagaaaaaaagaaaaagaagaag
gagaagaagagcaaggcagatgataaaaatgaaaataagaaggacccagagaagaaaaag
aagaaggagaaggaaaaagagaagaaaaagaaggaggagaaagacaaagacaagaaggaa
gaggagaagaaagaagtggtgattattgatccttcgggaaacacctactacaactggctg
ctttgcatcaccttacctgtgatgtacaactggacaatgattattgcaagagcatgtttt
gatgaactccagtctgattacatagaatactggctcatttttgattacgtatcagacata
atctacgttgttgacatgttcgtacgaacaaggacaggttatctggaacaaggattgctg
gtgaaagacaaattgaaactcatagagaagtataaagcaaacttgcagtttaaactcgac
gttctgtcaatggtacccactgatctgctgtatttcaagatggggtggaactatccagaa
attaggttaaaccggctgttaaggatctctcgaatgtttgagttcttccagcgcacagaa
acaaggaccaactatccaaacatctttaggatttcaaacctcgtcatgtacattgtcatt
attatccactggaatgcgtgtgtgtactactccatctcgaaggctattggatttgggaat
gacacatgggtctaccccgatgtgaatgatcctgaatttggccgcttggctcgaaaatat
gtctatagcctttattggtctacgctgactttaacaaccatcggcgaaactccacctcct
gtgctggattctgagtatatctttgtggtagttgacttcttaattggagttttaattttt
gccaccattgtcggtaacataggatctatgatttccaatatgaatgcagccagggcggaa
tttcaagcaagagttgatgctatcaagcaatacatgaatttccgaaatgtgagcaaagat
atggaaaagagggttattaaatggttcgactacctctggaccaacaaaaaaacagttgat
gagaaagaagtcttgaaatacctacctgacaaactgagggcagagatcgccatcaacgtc
cacttagacacgttaaaaaaggtccgcatctttgcagactgtgaagctggtctgttggtg
gagctggtgctgaagctacagccccaggtgtacagtcctggcgattacatatgcaagaaa
ggggacatcgggcgcgagatgtacatcatcaaagaaggcaaacttgctgtggtggccgat
gacggaatcacccagtttgtcgtgttgagtgatggtagctacttcggtgagatcagcatc
ctcaatatcaaaggcagcaaggccggcaaccgaagaacagccaatattaaaagcattggc
tactcagacctgttctgcctctcgaaagatgacctcatggaagcgcttacagagtaccca
gacgccaaaactatgctggaagagaaaggaaggcagattttaatgaaagatggtctactg
gatttaaacatcgcaaatctgggcagtgaccccaaagacctggaagagaaggtcacacga
atggaaggctcagttgacctcctgcaaacccgatttgcccgcatcttggctgaatatgag
tcgatgcagcagaaactcaaaaagaggttaaccaaggtcgagagatttctgaaaccactt
atcgaaacagaattttcagctcttgaggaacctggaggagaaagtgagcacgcagagtct
gcatgggactga
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