Chionomys nivalis (European snow vole): 130877333
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Entry
130877333 CDS
T11437
Symbol
Cnot6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130877333 (Cnot6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130877333 (Cnot6)
Enzymes [BR:
cnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
130877333 (Cnot6)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130877333 (Cnot6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130877333 (Cnot6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130877333
NCBI-ProteinID:
XP_057630509
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Position
7:complement(31724144..31774490)
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AA seq
557 aa
AA seq
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MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSCIPSDIAKLHNLLYLDLSHNQIQSLPAELGNMVSLRELHLNYNQLRVLPFELGKLF
QLQTLSLKGNPLTQDILNLCLEPDGTRRLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggtagagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcctgtattccttcagacattgccaagcttcacaatctgctatatctggac
ctgtcccataaccaaatccagagtttaccggcagaactcggaaacatggtatcactcagg
gagctccatttaaattacaaccagttacgagttctaccttttgagctgggaaaactgttt
cagttacagactttaagcctgaaaggaaatccacttacccaagatatattgaacctctgt
ctggagccagatggaacaagaaggctactgaactacttgctcgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcgtggatcatgttacaagaacca
gacagaacaagaccaacggccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcatgggcgttaaactgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatattatcagtcttcaggag
gtcgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattcttcagtcctaagtctagagctaggacgatgtcggaacaagaaagaaagcatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaaccagctagcaatggcgaactcagaagggtctgaagctatgctgaacagagtc
atgacgaaagataatattggagttgctgtactgctagaacttcgaaaggaattaattgag
atgtcatctggaaaaccacatctgggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactcagatgtgaagttggtacaaactatgatgttcctc
tcagaagtgaagaatattattgataaagcctctcggagcctcaaatccagtgtgttggga
gaatgtggaactattccgcttgtcttatgtgcagatctgaattctttgccagactctggt
gttgtagagtatttgagcactggtggggtagagaccaatcataaagactttaaggaactg
aggtacaatgaaagtctcacaaacttcagctgtaacgggaagaatggtatgaccaatgga
aggatcactcatggtttcaagttaaagagtgcctatgagaatggcctgatgccttacacg
aattacacatttgatttcaagggtataattgactatatcttctattctaaacctcaactg
aatactttggccatcctgggacctctggaccaccattggctagttgaaaataatatcagc
ggctgcccacatccacttattccctccgaccacttctcactttttgcacaattagagctc
ttactgcctttcctgccccaggttaatggcattcaccttcctggcaggaggtag
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