Chionomys nivalis (European snow vole): 130878417
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Entry
130878417 CDS
T11437
Symbol
Ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03420
Nucleotide excision repair
cnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130878417 (Ercc4)
03460 Fanconi anemia pathway
130878417 (Ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnl03032
]
130878417 (Ercc4)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130878417 (Ercc4)
DNA replication proteins [BR:
cnl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130878417 (Ercc4)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130878417 (Ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
130878417
NCBI-ProteinID:
XP_057632356
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All DBs
Position
7:complement(1551351..1579058)
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AA seq
916 aa
AA seq
DB search
MERCLPALGKAMAPLLEYERQLVLELLDSDGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGIIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLSIQTAILDILSACLKEL
KCHNPSLEVEDMSLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDAKLNKKTKMSKK
VASAEAQETKKELVLESNPKWEALSEILKEIEAENKESEALGGPGQVLICASDDRTCCQL
RDYLTMGAEAFLLRLYRKTFEKDSKAEEAWMNFRKEDGAKRTKKSDKRPKDAQNKERTST
KKGAPRRKKRELTLTQVVGTAEEPPEDGAEEEGRPRQVASSPEGCGGEVQQEAFDLNLSS
DAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLARGT
VSTDAPTDTRKAGGQERNGTQPSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
ELCVERKSVSDLIGSLHSGRLYSQCLAMSRYYRRPVLLIEFDAGKPFSLAPRGAFFQEIS
SSDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEELKQNKPQPDAATAMAITADSETLPE
SDKYNPGPQDFVLKMPGINAKNCRSLMNQVKNIAELASLSQERLTSILGHAGNAKQLHDF
LHTAYADVVSGGRVRK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgcctgccggccttaggcaaagcaatggcgccgctgctggagtacgagagg
cagctggtactggaactgctcgacagcgacgggttggtggtgtgcgcccgcgggcttggt
gccgaccgacttctctaccattttctgcggttgcactgccacccggcctgcctggtgctg
gtgctcaacacgcagccagccgaggaggaatattttatcaaccagttgaagatagaagga
gttgaacacctccctcgacgtgtgacaaatgaaatcacaagtaacagtcgctatgaagtg
tacacacaaggtggtattatattcgcaacaagtcgaatacttgtggttgatttcttgact
gataggataccttcagatttaataactggcatccttgtgtacagagcgcacaggatcatt
gagtcctgccaagaagccttcatcctgcgtcttttccgccagaaaaacaagcgtggcttc
atcaaagctttcacagacaacgctgtagctttcgacactgggttttgtcatgtggagaga
gtgatgaggaaccttttcgtgaggaagctctacctgtggccgaggttccatgtagcagtc
aactcattcttagaacagcacaagcctgaagtggtagagattcacgtgtccatgactcct
gccatgctctctatccaaacagccatactcgacatcttaagcgcatgtctgaaggaactg
aagtgccacaacccatctctagaagtggaagatatgtccttagaaaatgcgctcgggaag
ccgtttgacaagacaatccgccattacttggaccctttatggcaccagcttggagccaag
actaaatccttggttcaggatctgaagatactaaggaccctactgcagtatctctctcag
tatgattgtgtgacatttctcaatcttctggaatctctgagagctacagagaaagtgttt
ggccagaactcaggctggcttttcctggatgctagcacctccatgtttgtgaatgcccgt
gcacgagtgtatcgcgttccagatgccaaactgaacaaaaagaccaaaatgtccaagaag
gtggcaagtgcagaagcgcaagaaacaaaaaaggaactggtcctagaaagcaacccaaag
tgggaggcgttaagtgaaatcctgaaagaaatcgaagctgaaaataaggagagtgaagcc
cttggaggtccaggccaggtgctgatctgtgcaagtgatgaccgcacatgctgccagctc
agagactacctgaccatgggggcggaagccttcctgctgcggctctacaggaaaaccttt
gagaaggacagcaaagctgaagaagcgtggatgaattttagaaaggaggatggcgcaaag
agaaccaagaagtctgacaagagacccaaagatgcccagaacaaagaacgcacctctacc
aaaaaaggggctcccagaaggaagaagcgagagctgactctgacgcaagtggtggggact
gctgaagagccgccagaggatggggctgaggaggaaggccgccccagacaggtcgccagt
agcccagaaggctgcggaggggaggttcagcaggaagcttttgatttaaatttatcatct
gatgcggcctatggcatcctgaaagagcctctgaccatcatccatccgcttctggggtgc
agcgacccctatgccctgacgcgggtactgcacgaggtggagcccagatacgtggttctg
tatgacgcagagctcaccttcgtccgccagctagagatctacagggccagcaggccgggg
aaaccgctgagggtttactttcttatctatggaggctccacagaagagcagcgctacctg
acggctctgcgaaaggagaaagaggcctttgagaagctcatccgggaaaaggctagtatg
gttgtccctgaagaacgggaaggcagagatgaaaccaacctggacttagcaagaggcacg
gtgtccacagatgctcccactgacactcggaaggctggtggccaggagcggaatggcacc
cagcccagcatcgtggtggacatgcgtgagttccggagtgagctaccatccctgatccat
cggaggggcatcgacattgaaccagtgacactggaggtgggcgattacatcctgacacct
gagctgtgcgtggagcgcaaaagtgtgagcgatctcatcggctcactgcacagcggccgc
ctgtacagccagtgcctcgccatgtcacgctactaccggcgcccagtgctgctcatcgaa
ttcgacgcgggcaagcccttctccctggcgccacgtggtgccttcttccaggagataagc
agcagcgatgtgagctccaagctcacactcctcaccctgcacttcccacgcctgcggctg
ctctggtgcccctcacctcatgccacagccgagctgttcgaggagctgaagcagaacaag
ccgcagcctgatgcagccacagccatggccatcacggcagactcggaaacgctgcctgag
tcagacaagtataaccccggcccccaagacttcgtgctaaagatgccagggatcaatgcc
aagaactgtcgctccctgatgaatcaagtgaagaacatcgcagagctggcctctctgtcc
caggagcggctcacaagcatcctggggcatgcaggaaacgccaaacagctgcacgacttc
ctccacaccgcttatgcagacgtggtgtcgggaggcagagtgagaaaatga
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