Chionomys nivalis (European snow vole): 130878484
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Entry
130878484 CDS
T11437
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnl03009
]
130878484 (Ddx52)
Enzymes [BR:
cnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130878484 (Ddx52)
Ribosome biogenesis [BR:
cnl03009
]
Eukaryotic type
90S particles
Helicases
130878484 (Ddx52)
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-GeneID:
130878484
NCBI-ProteinID:
XP_057632457
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All DBs
Position
7:64601932..64628222
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AA seq
598 aa
AA seq
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MDAYDLFRRLGAGAKFDVKRFSADAARFQVGKRKCDPDSSEVLQGLDFFGNKKNVSDECG
TLQTHQELQNEKTEGDLLERSKEPRKKKRKKMISEITAQEDFDTTIQWTSSVEAKIQEEK
RAKEEKKLTSGKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSPKVKRAMFSATFAYD
VEQWCKLNLDNVVIVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GINLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERQSISTTPKYFLEQAKQKKVAGQNSKKKETLEEKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctatgatctgtttcgccggctcggagccggcgccaagttcgacgtgaagcgg
ttctcggcagacgctgctcgattccaggtaggaaaaaggaaatgcgatcctgattcttcg
gaggtactccaaggactggacttcttcggaaacaagaagaatgtctcagatgagtgtgga
acattacaaacacaccaggagctccaaaatgagaagacagagggggatctgttggagaga
agtaaggagcccaggaagaaaaagagaaagaagatgatttcagagattactgcacaagaa
gactttgacactactatacagtggacgtcctctgtagaagcaaagattcaagaagagaaa
agagccaaagaagaaaagaaactaacttcaggaaagttggaacatctcagaaaggaaaag
atcaacttctttcggaacaaacacaagatacatgtacaaggaactgatcttcctgaccca
attgctacatttcagcagcttgaccaagaatataaaatcagttctcgattgctccagaac
attctagatgcaggcttccaagtgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctcctactggatctgggaagactctggctttt
agcattcccattttaatgcagctgaaacaacctgcaaataaaggctttcgagccctggtt
atatccccaactcgagaacttgccagccagattcatagagaattaattaaaatatctgag
ggtacaggattcagaatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgacattcttgtgactaccccaaatcgactgatctacttg
ctaaagcaggatccaccagggatagacctgacaagtgttgaatggctgatagtagatgag
tcagacaaactgtttgaagatggcaaaactgggtttagagaccagctggcttccattttc
ctggcctgcacatcccccaaggtcaaaagagcaatgttcagtgcaacttttgcgtatgat
gttgagcagtggtgcaagctcaacctggacaacgtcgttatcgtgtccattggagcaagg
aattctgcagttgagactgttgaacaagaacttctctttgttggctctgagactggaaaa
cttctggccatgagagaacttgttaagaagggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtg
gatgtcattcatgcagaaagaacacagcagcagcgagataacacagtccacagcttcaga
gcgggtaaaatctgggttcttatttgtacagccttgctcgcaagagggattgattttaaa
ggcataaacctggtcatcaattatgattttccaaccagctcagtggaatacatccatagg
ataggtcgaactggaagagcagggaacaggggaaaggctgttacatttttcactgaagat
gataaaccattattaagaagtgtcgccaatgttatccagcaggctggttgtcctgtacct
gaatacataaaaggtttccagaaactattaagcaaacaaaagaaaaagatgattaagaaa
ccactggaaaggcagagcattagtacaactccaaagtatttcttagagcaagccaaacag
aaaaaggttgctggccaaaacagcaagaagaaagaaactcttgaagagaaaagttaa
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