Chionomys nivalis (European snow vole): 130878490
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Entry
130878490 CDS
T11437
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130878490 (Sox30)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130878490 (Sox30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130878490
NCBI-ProteinID:
XP_057632466
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Position
7:28573406..28606690
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AA seq
774 aa
AA seq
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MERARPEPPPQPRQPPRPTPPRPLRPAPPAQQPVEAATFRAAAAERPESPPAQATAAIAA
VASSCGDVSAAGAQAGTRRLLQVKPEQVLLLPPPGPLLPQVPDEGAAAAAAAVASSAQAR
LLQLRPELLLLPPPSAADGGPCRPELRSMQPRTLLVKAEKQELGAGLDLSVGSRRTTEAG
PRASRAAKLDGTGKALDGRRGEEKKAKLEVEETSRDALKGGEGRSLLVGEGVIKTEEPDR
LRDDCRLGSEAASNGLVHGSKDALLAQPPSAFGPHQQDLRFPLTLHAVPPGARIQFQGPP
PSELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKR
PMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHRE
EFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPGLQNTIT
HPVGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGPVAGPPPSLTPRPSLPPQRFTGSPQT
DVHRLPSGTSRSVKRPTPVSLESTSRIPAGASTAHARFATSPIQPPKEYASVSTCPRSTP
IAPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYG
NFPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESVDGPPYYNS
HGHSGAEYLNPMPPLDIGALENVFTAPASAPSGVQQVNVTDSDEEEEEKVLRNL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccagaccggagccgccgccgcagccgcgccaaccgccgcggcccacccca
ccgcgcccgttgcgccccgctccgcccgcgcagcagcccgtcgaggccgccaccttccgg
gccgcggccgccgagcgcccggagtcgccgccggcccaagccacggccgccatcgccgca
gtggcctcatcgtgcggggacgtctcggcagccggtgcgcaggctgggacgcgtcgtctg
ctgcaagtgaagccggagcaggtgctgctgctgccgccgcccgggccgctgttaccgcag
gttcctgacgagggtgcggccgccgctgctgccgccgtcgcgtcgtccgcgcaggcgcgc
ctgctgcagctgagaccggagctgctgctgttgccgccgccgtcggcggccgacggaggc
ccttgcaggccggagctgcgctccatgcagccccggacgctgctcgtcaaggccgagaaa
caggagctgggggcaggcttggacctgtcggtaggatctcggaggaccaccgaggccggc
cccagagcctccagggccgccaagttggatggcaccgggaaggccctcgacggccgccga
ggggaggagaagaaagccaagttggaggtggaggagacctcgagggatgcgctgaaaggc
ggcgaaggcaggagcttgcttgtcggagaaggagtcatcaagaccgaggagccagacaga
ctcagggacgattgcaggctgggctcggaagccgcgtccaatggcctggtccacggcagc
aaggatgctctcctggcccagccgcccagtgccttcgggccgcatcagcaagacctacgg
ttccctttgactctccacgcggtccctcctggggcccgtatccaatttcaggggcctccg
ccttctgagctaatacgcttgtccaaggttcccctgacaccagtgcctattaaaatgcag
tccttactggagccttctgtaaaaattgaaaccaaagatgtccccctcaccgtgcttccc
tcagacgcaggaatacctgatactcccttcagtaaggacagaaatggccatgtgaagcga
cctatgaatgcatttatggtttgggcaagaatccaccggccagcactagccaaagctaac
ccagccgccaacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagt
gaagaacaaaagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagag
gaatttcctggttgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagt
gtttccaatgtattttctggtaccacacagaatattatctctacaaatcctacaacaatt
tatccttatcgctcacctacctactctgtggtaattcccggccttcagaacaccatcact
catccagttggtgaagccccacctgctatccagctgcccacacctgcagtccagcgccca
agccccatcacacttttccagcccagcgtctccagcactggcccggtggccggtccgcct
ccaagtctgacgccccgcccatcactccctcctcagcgcttcactgggtctccgcaaaca
gacgttcataggcttccttcgggaaccagtcgctctgtgaagagacccactccagtgtct
ctggagagcaccagcaggattccagctggtgcaagtactgcccatgccagatttgcaacc
tcacctatccagcctcccaaggaatatgccagcgtttccacgtgtccccgaagcactcca
attgccccagctactcccattccacactcacacgtctatcagcccccaccccttggtcat
ccagccacactttttgggacaccaccacgattctcgtttcatcacccttacttcctacct
ggacctcattacttcccatcaagcacgtgcccttatagtcggcctccttttggttatggg
aattttccaagttcaatgccagaatgtcttggttactatgaagacaggtaccaaaagcat
gaggctatattttcagctttgaatagagactatcctttcagagactacccagatgagcac
acacacagtgaagattctcggagctgtgagagcgtggatgggcccccgtactacaacagc
catgggcacagtggagcagagtacttgaatcccatgcctccactggacattggagccctg
gagaatgtcttcacagcccctgcgtcagctccctctggcgtccagcaagtcaatgtcact
gacagcgacgaggaggaagaagaaaaagtgctcaggaatttataa
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