Chionomys nivalis (European snow vole): 130878748
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Entry
130878748 CDS
T11437
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03030
DNA replication
cnl03420
Nucleotide excision repair
cnl03430
Mismatch repair
cnl03440
Homologous recombination
cnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130878748 (Rpa1)
03420 Nucleotide excision repair
130878748 (Rpa1)
03430 Mismatch repair
130878748 (Rpa1)
03440 Homologous recombination
130878748 (Rpa1)
03460 Fanconi anemia pathway
130878748 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130878748 (Rpa1)
03032 DNA replication proteins [BR:
cnl03032
]
130878748 (Rpa1)
03400 DNA repair and recombination proteins [BR:
cnl03400
]
130878748 (Rpa1)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130878748 (Rpa1)
DNA replication proteins [BR:
cnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130878748 (Rpa1)
DNA repair and recombination proteins [BR:
cnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130878748 (Rpa1)
MMR (mismatch excision repair)
130878748 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
130878748 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130878748
NCBI-ProteinID:
XP_057632826
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Position
7:complement(56114528..56167038)
Genome browser
AA seq
614 aa
AA seq
DB search
MVGHLSEGAIATIMQKGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEGEQLASNCICQVNRFIVNTLKDGRRVVILMDVEVVKSAEAVGVKIGNPVPYNE
GHGQQQVVPSPASATTPPASKPQPQNGSLGMGSTVAKAYGASKPFGKPAGTGLLQPSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDETGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLLCEDDRNLPTVQF
DFTGIGDLESKSKDSLVDIIGICKSYEDSTKITVKSNNREVAKRNIYLMDMSGKVVTTTL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLRSGGTGGSNTNWKTLYEAKSENLGQGDKADYFSTVATVMFLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANVADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
DYAKRLIMNIRRNI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtgggacatctgagcgagggggccattgcgaccataatgcaaaagggagatacatcc
ataaagcccgtccttcaagtcattaacatccgtcccattactacagggaatagtccaccc
cggtatcgactgcttatgagtgatggattgaacacgctctcctcattcatgttggccaca
cagctgaaccctcttgttgagggggagcagctggccagcaactgtatctgccaggtcaac
cgattcatcgttaacaccctgaaagacggaaggagagtggttattttgatggacgtggaa
gttgtgaagtcagctgaagcagttggagtaaaaattgggaacccagtgccctataatgaa
ggccatgggcagcagcaagttgttccttctccagcctcagcaaccacaccaccagccagc
aagccccagccacagaatggaagcttgggaatgggttccactgtggctaaggcttatggt
gcctcaaagccatttggaaaacctgctggaactggcctgctgcagccttcaggagggaca
cagtccaaagtggtacccatcgccagcctcaccccttaccaatccaagtggaccatttgt
gcccgtgtcaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctctatagagcttgtggatgaaactggtgaaatcagagcgactgctttcaacgaa
caggtggacaagttctttccccttattgaagtgaacaaggtgtattatttctcaaaaggc
actctgaagatcgctaacaagcaattctcggctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtccttctctgtgaagatgaccgtaacttacccacagttcagttt
gatttcacagggatcggtgacctagagagcaagtctaaagactcacttgtagacataatc
gggatctgcaagagctacgaagattcaactaaaatcacagtgaagtctaacaacagagaa
gtggctaagagaaatatctatttgatggacatgtcagggaaagtggtgactacaactctg
tggggagaagatgccgacaagtttgatggttctagacagcctgtgatggctatcaaagga
gcccgggtttctgactttggcggacgaagcctctctgtcctgtcatctagcactgtcatt
atgaatcctgacatcccagaggcctataagcttcgtggatggttcgactccgaaggacaa
gccttagatggtgtctccatctctgacctcaggagcggaggcaccggagggagcaataca
aactggaaaactttgtacgaggctaaatctgagaacctgggccagggtgacaaggctgac
tatttcagcaccgtggcgacggtgatgtttcttcgcaaagagaactgtatgtaccaggcc
tgcccaacccaggactgcaataagaaagtgattgaccagcagaatgggttgtaccgctgt
gagaagtgtgaccgggaatttcccaacttcaaataccgcatgatcttatcggcaaatgtt
gcagattttcaagagaaccagtgggtgacgtgtttccaggagtctgcagaggctatcctt
ggacagaatactgcgtaccttggggagctgaaagaaaagaacgagcaggcgtttgaagag
gtttttcagaatgccaacttccgatcatttacattcagaatcagggtcaagctggagacc
tacaatgacgaatctcgaattaaggccactgtgatggacgtgaaaccagtggactacaga
gactatgccaagaggctgatcatgaacatcaggaggaacatatga
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