Chionomys nivalis (European snow vole): 130879102
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Entry
130879102 CDS
T11437
Symbol
Shank2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
130879102 (Shank2)
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GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
DUF6073
PI3K_rbd
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
130879102
NCBI-ProteinID:
XP_057633131
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All DBs
Position
8:complement(52974365..53415904)
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AA seq
1909 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSMGSESDSSKEETIYDTIRATTEKPSGPKMEEIQDNTLVIR
VLIQDLQQTKCIRFNPDATVWVAKQRILCTLNQGLKDVLNYGLFQPASNGRDGKFLDEER
LLREYPQPTGQGVPSLEFRYKKRVYKQSNLDEKQLARLHTKTNLKKFMDHTQHRSVEKLV
KLLDRGLDPNFHDLETGETPLTLAAQLNDSMEVIKVLRNGGAHLDFRARDGMTALHKAAR
MRNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEHASVCCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQDSCARVLLFRGGNKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPLVPTRRAISGVPPCSHRPTMGWARSCT
MDEPAGLRPPALGFHRTCSGEQSHWTSSVPFREAPAYSNRRRRPPNTLAAPRVLLRSNSD
NNLHAGAPEWAVCSAATSHRSLSPQLLQQTPSKPDGATKSLGSYVPGPRSRSPSLNRLGG
TGEDGKRPQPHWHVGSPFTPGTNKDSLSTFEYPGPRRKLYSAVPGRLFVAIKPYQPQVDG
EIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRDSQAETRADRSKKLF
RHYTVGSYDSFDAASDCIIEDKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQ
YLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNL
DPDDTARKKAPPPPKRAPTTALTLRSKSMTAELEELGLSLVDKASVRKKKDKPEEIVPAS
KPSRTAENVAIESRVATIKQRPTSRCFPAASDVNSVYERQGIAVMTPTVPGSPKGPFLGL
PRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPP
PPSPTTYNCPKSPTPRVYGTIKPAFNQNPVAKVPPATRSDTVATMMREKGMFYRRELDRF
SLDSEDVYSRSPAPQAAFRTKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNV
EDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQATEPGQLRPDDSLTVSSPFAA
AIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRIRPSNFPEEGGFGDEDGTEQ
PLSPTPGTAPRELENHFLGGGEAGTAGETGGPLSSTSKAKGPESGLAAPLKSGSPVSPEN
YVHPLTGRLLDPSSPLALALSARDRAMQESQQGHKGEAPKADLNKPLYIDTKMRPSVESG
FPPVTRQNTRGPLRRQETENKYETDLSKDRRGDDKKNMLINIVDTAQQKSAGLLMVHTVD
IPTAGPPLEEEEDREDVDIKPDHSPSTVPEGVPKTEGALQISAAPEPAATPGRTIVAAGS
VEEAVILPFRIPPPPLASVDLDEDFLFTEPLPPPLEFANSFDIPDDRAASVPALADLVKQ
KKNDTPQPPSLNSRQPANSTDSKKPMGISNCLPSSFLPPPENFDAITDSGIEEVDSRSSS
DHHLETTSTISTVSSISTLSSEGGESMDTCTVYADGQAFVVDKPPVPPKPKMKPIVHKSN
ALYQDTLPEEDTDGFVIPPPAPPPPPGSAQASMAKVIQPRTSKLWGDVTEVKSPILSGPK
ANVISELNSILQQMNRGKSIKPGEGLELPVGAKSANLAPRSPEIMSTVSGTRSTTVTFTV
RPGTSQPISLQSRPPDYESRTSGPRRAPSPVVSPTELNKEILPTPLSAAAASPSPTLSDV
FSLPSQSPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNL
GEHKETFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcagccccacatctagtgaggacgagatggcccaaagcttctccgactattcc
atgggctcagagtcagatagttccaaagaagagaccatctatgacacgattcgggccact
acagagaaaccaagcggcccgaagatggaggagatccaagacaacaccttggtgattcga
gtactcatccaggatctgcagcagacaaagtgcattcgatttaacccagatgccaccgtg
tgggtggccaagcagcgaatcttgtgtaccctgaaccaaggcctgaaggatgtactcaac
tatgggctcttccagccggccagcaatgggcgggacggcaagttcctggatgaggaacgg
ctgctgcgggaatacccacagcccacgggccagggtgtgccttccctggagtttcgctat
aagaagcgtgtgtacaagcagtccaacctggatgagaagcagctggctaggctccacaca
aagaccaatctgaagaagtttatggaccacactcagcatcgctctgtggagaagctggtc
aagctgctggacagaggcctggatcccaatttccatgacctggagactggagagacgccc
ctgaccctggctgcccagctcaatgactccatggaggtcatcaaagttctcagaaatggg
ggtgcacatttggatttccgtgccagggatgggatgaccgcccttcacaaggctgcccgg
atgaggaaccaggttgccctgaagaccctcctggagctcggtgcctccccagactacaag
gacagctatggactcacaccattgtatcacacggccattgtggggggtgacccttactgc
tgcgagctccttctccatgagcatgcctccgtgtgctgcaaggacgagaacggctggcat
gagatccaccaggcctgcaggtacggccatgtccagcatctggaacatctgctcttctat
ggcgcggacatgagtgcacagaacgcctcgggaaacacggctctgcatatctgtgctctc
tacaatcaggacagctgtgccagagtgctgctgtttcggggcggaaacaaggaattgaaa
aactacaacagccagacgccatttcaggtggcaataatagcggggaactttgaacttgca
gagtacatcaagaaccacaaggaaacagacatcgtaccccttgtgccaaccaggagggcc
atctctggggttcctccctgctctcaccgccctaccatgggctgggcccggtcttgcaca
atggatgagccagctggcctgcgccctccagcactgggcttccacaggacctgcagcggg
gagcagtcccactggaccagcagtgtgcccttccgagaggccccagcttattccaaccgc
aggcggcggccccccaatacattggctgcccccagagttcttctgcgttccaatagcgac
aacaacctccatgctggtgcaccggaatgggctgtctgttctgcagccacctcccaccga
agcctctcaccccagctgctgcagcagacacccagcaagcccgatggagccacgaagagc
cttggaagctatgtccccgggccccgcagtcgctccccctcactcaacaggctcggtggc
actggcgaggatggcaagagaccacagccacattggcatgtggggtcgcccttcactcct
ggtaccaacaaggactccctttcaacctttgagtacccagggcccaggaggaagctgtac
agtgcggtgcccgggagactcttcgtcgccatcaagccataccaaccccaagttgacggc
gagatcccccttcatcgaggcgacagagtcaaagttctgagcattggcgagggcggcttc
tgggaaggcagcgcccgtggccatatcggatggttcccggctgagtgtgtggaggaggtg
cagtgcaaaccccgggacagccaggcagaaacccgtgctgaccgcagcaagaaactcttc
cggcattacacagtgggctcttatgacagcttcgatgctgccagtgactgcattattgag
gacaagacggtggtcctgcagaagaaagacaacgagggctttggattcgtgctccgaggg
gcaaaagccgatacccccattgaggagttcacaccgacaccggcattcccagccctgcag
tacctggagtccgtggatgaaggtggggttgcgtggcaagccggactaaggaccggggac
ttcttgattgaggttaacaatgaaaatgtcgtcaaggtgggccaccggcaggtggtgaac
atgatccgccagggagggaatcacctcgtccttaaggtcgtcacggtgaccaggaatcta
gaccctgatgatactgccagaaagaaagctcccccacctccaaagcgggctccgactacg
gcccttaccctgcgttccaagtccatgacagcagaactggaggaactcggcctctcacta
gtggacaaagcctcagtccggaagaagaaggataaacctgaagagatagtgccagcctcc
aagccttccaggaccgcagagaatgtggccatagaatcgagggtggcgacaatcaagcag
cggcccactagccggtgcttcccagcagcctctgatgtgaactccgtgtacgagcgccaa
gggattgctgtaatgacgcccacggtccctgggagcccgaaaggcccatttctgggcctc
cctcgaggtacgatgcgaaggcagaaatcgatagacagcagaatctttctatcagggata
acagaggaagagcggcagtttctggctcccccgatgctgaagttcacccgaagcttgtcc
atgccagacacttctgaggacataccccctccgccgcagtctgtgcccccatctccccct
ccaccttcccccaccacgtacaactgccccaagtccccgactccaagagtctatgggaca
attaagcctgcattcaatcagaaccccgtcgccaaggtgccgccagcgaccaggtctgat
actgtggccaccatgatgcgggaaaaggggatgttctacaggagagagctggaccgattc
tccctggactctgaagatgtctacagccgcagccccgccccacaggccgccttccgcacc
aagcggggacagatgcctgagaacccatactcagaggtggggaagatagccagcaaggct
gtctacgtccctgccaagccagccaggcggaagggcatgctggtgaagcagtccaacgtg
gaggacagccctgagaagacatgctccatccccatcccaaccatcatcgtcaaggaaccc
tccaccagcagcagcggcaagagcagccagggcagcagcatggagatcgacccccaggcc
accgagcctggccagctgaggccagatgacagcctcactgtcagcagtcccttcgctgcc
gccattgctggggctgtgcgtgaccgggagaagcgtctggaagccaggaggaattccccg
gccttcctctccacagacctgggagatgaggatgtgggtctggggccacctgctccccgg
atacggccctccaacttccctgaggaaggtgggtttggtgacgaggatggaacagaacag
ccactatcgcctacccctgggacagcacccagggagctggaaaaccacttcctaggtggt
ggtgaggctggtactgcaggggagaccgggggacccctgagttccacatctaaagccaag
gggcctgagagtggcctagcagctcctctcaagagtggcagcccagtcagccctgagaat
tacgtgcacccactcacagggcggttgctcgaccccagctccccactggccctggcactc
tccgccagggatcgagccatgcaggagtctcagcaggggcacaagggggaggcccccaag
gctgacctcaacaagcctctctacatcgataccaaaatgcggcccagtgtggagtccggc
tttcctccagtcaccaggcagaacacccggggtcccctgcgacggcaagagacagagaac
aagtacgagacagacctgagcaaggaccggaggggtgacgataagaagaacatgctgatc
aacatcgtggatacggcccagcagaagtcagccggcctgctgatggtgcacacggtggac
atccccacggcagggccacccctggaggaagaggaggacagagaggatgtggatataaag
ccagaccactcaccctccacagtgccagaaggcgttcccaaaaccgaaggtgctttacag
atctccgctgccccggagcccgccgctacgcccggcaggaccattgtggcagcgggctcc
gtggaagaggcagtgattctgccattccgcatcccccctccccctctggcgtccgtggac
ttggatgaggacttccttttcacagaaccgttgcctcctcccctggaatttgcaaatagt
tttgatattcctgatgaccgggcagcttcagttcccgctcttgctgacttggtcaagcag
aagaaaaatgacacccctcagcccccttcgttgaactccaggcagccagccaactctaca
gacagtaagaagccaatgggcatttcaaactgtctgccctcctcattcctgccacccccc
gaaaactttgacgccatcaccgactccgggatcgaggaggtggacagccggagtagcagc
gaccaccatctcgagacaaccagcaccatctccacagtgtccagtatctccacactgtcc
tcagagggtggggagagcatggatacctgtacagtctatgcagacgggcaagcctttgtg
gttgacaaacccccagtacctccaaagccaaaaatgaagcccattgtgcacaaaagcaac
gcactttaccaagacacgctcccggaagaggacacagatggcttcgtgatccccccaccc
gcacccccgcccccaccgggcagtgcccaggccagtatggcgaaagtcatccagccaagg
acctccaagttgtggggtgatgtcacagaggtcaaaagcccaattctctcaggcccaaag
gcaaatgtcattagtgagctaaactccattctgcagcagatgaacagggggaaatccatc
aagcccggggaagggctggaactgcccgtgggagccaagtcagccaacctcgctccaaga
agccccgagatcatgagcacagtctcaggaacacggagcactacggtcaccttcactgtt
cgccccggcacctcccagcccatctccctgcagagccggccccccgactatgaaagcagg
acctcaggaccacggcgtgccccgagccccgtggtctcacccacagaattgaacaaagag
attctgcccacccctctgtctgctgccgcagcctctccctcccccacactctcagatgtc
tttagccttccgagccagtcccctgcaggggacctctttggcttgaacccagcaggacgc
agcaggtcaccatctccttcaatactgcaacagccaatctcaaataagccttttacaact
aagcctgtccacctgtggacgaaaccagacgtggcagactggctggaaagtctgaacttg
ggcgaacacaaggagaccttcatggacaatgagattgatggtagccacctgccaaacctc
cagaaggaagacttgatagatctgggggtgactcgagtcgggcataggatgaacatagaa
agggctttgaaacagctgctggacagataa
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