Chionomys nivalis (European snow vole): 130879149
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Entry
130879149 CDS
T11437
Symbol
Atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin-2
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl05014
Amyotrophic lateral sclerosis
cnl05017
Spinocerebellar ataxia
cnl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130879149 (Atxn2l)
05017 Spinocerebellar ataxia
130879149 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
130879149 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130879149 (Atxn2l)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130879149 (Atxn2l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
130879149
NCBI-ProteinID:
XP_057633249
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All DBs
Position
8:70369754..70382131
Genome browser
AA seq
1080 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLPATTAPPGPPAAVSPCLG
PAAAAGSGLRRGAESILAAPPPPQPGAVAIGSVRGQSTGKGPPQSPVFEGVYNNSRMLHF
LTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFK
PSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESD
MSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESS
PQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRGGVRC
SGSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPN
NRPSGEASVPPAPAALAFLPVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVVSSASIPVT
SSVVDPGTGSISPASPKISLAPTDVKELPTKEPGRTLEAQELARIAGKVPGLQNEQKRFQ
LEELRKFGAQFKLQPSSSPETGLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTE
SILDKEDKPPLAAVGGTEGPEQLPPSCPSQTGSPPVGLIKGDDKEEGPVTEQVKKSTLNP
NAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVA
ATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTP
QYPSAEQPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQ
APHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTN
MAHVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPS
PYPYIGHPQVCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPAAPLPTASPALSDPDCLLT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggcctcccggcgggaccagccctcctaacggcggcctcccgggg
ccgctgcccgccaccacggctcccccggggcctcccgcggccgtctctccctgcctgggg
cctgcagccgctgccgggagcgggcttcgccgcggagccgaaagcatcttggcggcaccg
ccgccaccgcagccaggggcagtggctattggcagcgtcaggggacagagcaccggaaag
ggacccccacagtcgcctgtgtttgaaggtgtttacaataactccaggatgctgcatttc
ctgactgctgtggtgggttctacttgtgacgtaaaggtgaaaaatggcaccacctatgag
ggcattttcaaaaccctgagctcaaagtttgagctggcagtagacgcagtacaccggaaa
gcatctgaaccagcaggtggacctcggcgggaagacattgtggacaccatggtgtttaaa
ccaagtgatgttctgcttgtccacttccggaatgttgacttcaattatgctacgaaagac
aagttcactgactcagccatcgccatgaactctaaggtgaatggagaacacaaggagaag
gtgctacaacgttgggagggtggcgacagcaacagcgatgactacgatctggaatctgat
atgtccaatggatgggatcccaatgagatgttcaaatttaacgaagagaactatggcgta
aaaaccacctatgatagcagtctatcttcttacacggttcccttggaaaaggacaactca
gaagagtttcggcagcgggagctgcgtgcagcccagttagctcgagagattgagtcaagt
ccccaatatcgcctacggattgccatggaaaatgatgatgggcgaacggaggaggagaag
cacagcgcagttcagcggcaggggtctgggcgggaaagccccagcttggtgtccagggaa
gggaagtatatccctctgcctcaacgagttcgggaaggtccccggggaggagttcgatgc
agcggctctcgaggagggcgacctggtcttagctctttgccacctcgtggacctcaccat
cttgacaatagcagccctggccctgggtctgaggcacgtggtatcaatggaggcccttcc
cgcatgtcccccaaggcacagcgccctttgagaggtgccaagactttatcttcgcccaac
aataggccttctggagaagcttctgttcctccagcacctgcagctctcgcttttcttcca
gtgggccggatgtaccctccacggtctcccaagtctgctgcccccgccccagtctcagct
tcctgtcctgagcctcccattggttcagcagtagtgtcctctgcctccatccctgtgaca
tcatcagttgtggatcctggaacaggctctatttccccagcatctcccaaaatctccctg
gcccccacagatgttaaagaactcccaacaaaggagcccggtaggactttggaggcccaa
gagctggcccggatagctgggaaagtccctgggcttcagaatgaacagaaacgatttcag
ttggaagaactgaggaagtttggggcccagtttaagctgcaacctagtagctcccctgag
accggcctggatccatttccttcccggatcttaaaagaagaggccaaaggaaaggagaag
gaggtggatggcctattgacttcagatcccatgggatccccagtctcctccaagacagaa
tccatattggataaggaagacaaaccacccctggcagcagtagggggtactgaggggcca
gagcagctcccaccctcttgccccagccaaactggcagtcccccagtaggcctcatcaag
ggagatgacaaagaggagggccctgttactgaacaagtaaagaagtctactttgaacccc
aatgccaaggagttcaatccaacaaagcctctgctgtctgtgaacaaatctaccagtact
ccaacttcaccagggccccgtactcactcaacaccttccataccggtgctgacagcaggc
cagagtgggctctacagtccccagtacatctcatatatacctcagatccacatgggacca
gctgtgcaggcacctcagatgtatccatatcctgtttccaattcggtgcctggacagcag
ggcaagtaccggggtgcaaaaggctcacttcccccccagcgctcagaccaacaccagcca
gcctcagcccctccgatgatgcaggctgctgctgctgctgctggcccacccctagtggct
gccacaccttattcctcctacatcccctacaacccacagcagttcccaggccagcctgcc
atgatgcaacccatggcacactacccttcacagccggtgtttgcccctatgcttcaaagt
aacccacgaatgttgacatctggaagccacccccaggctattgtgtcatcctccactcct
cagtacccctctgcagagcagcctaccccccaagccctctatgccactgttcaccagtcc
tatccacaccatgccacacagctccatggccatcagccacagccggctaccacacctact
gggagccagccacaatcccagcatgcggcccccagtcctgttcagcaccaggcggggcag
gccccacacctgggcagtggacagccacagcagaatctgtaccatccaggggccctaaca
ggcacacctccctctctaccaccgggaccttctgcccagtcccctcagagcagctttccc
cagccagctgctgtgtatgccatccatccccaccagcagctgccccacggcttcaccaac
atggcccatgttacccaggcccatgtccaaactggagtcacagcagccccgcccccacac
cctggggcaccccacccgccccaggtgatgctgctgcaccccccccagggccatgggggg
cccccccaaggcgcggtgcccccgagtggggtgcctgcactctcagcttccacaccctca
ccctacccctacatcggacacccccaagtatgtagggtgggcagaagccacagtcgccgc
cgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgat
ccagcagcccccctccccactgcctccccagctctcagtgaccccgactgtctcctgact
tag
DBGET
integrated database retrieval system
