Chionomys nivalis (European snow vole): 130879624
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Entry
130879624 CDS
T11437
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130879624 (Tmc5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnl02000
]
130879624 (Tmc5)
03037 Cilium and associated proteins [BR:
cnl03037
]
130879624 (Tmc5)
Transporters [BR:
cnl02000
]
Other transporters
Pores ion channels [TC:
1
]
130879624 (Tmc5)
Cilium and associated proteins [BR:
cnl03037
]
Other cilia and associated proteins
Stereociliary proteins
130879624 (Tmc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
130879624
NCBI-ProteinID:
XP_057634307
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All DBs
Position
8:complement(78244335..78331250)
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AA seq
984 aa
AA seq
DB search
MSSFHGNSSYEGHADYPGYSRSQNRTQSYLKTQDHLDNPSFHHPRSNPYSSGSRTNPDYP
KPLAEADYPGSPSSADYRNARDPPFSVHSRTRPDYHESLPEPDYNDFRSDPYHTGSSPEP
DYPESQCHSGFARDRSSNNYADSRANLGYLGSLEEPDYPGAQGSSDHPGPRASSNLPGSR
RDVGHAGSRINSYLDTFGEPDYPGAENQPNSPHFYGEPDYPGAEGSKNASDFWGEPDYPG
AEEDHVYGSSKVFRRSNGPFGVLGRENEDSPEGIEMVPMEMAGQQGHSLPGDPRNGYVNS
AYERGSSPICADGNLLLCERDWHMSPQGQKLIASLVPMTSRDRIKTIRNQPRTMEEKREL
RKIVDKEKSKQRHGALEINCCAQCLSSLSLAYRRTRSNLSELLDYVSLWQKTFKVIGGKF
GTSVLSYFSFLRWLLKFNIFSFVMNFSFLIIPQFTVAERNTRHFTGLEFFTGAGYFTDTV
MYYGFYTNSTIQHGTGGPSYNMQLAYIFTIGACLVICFFSLLFSMAKYFRNNFINPHIYS
RGIAKLVFCWDFTVTHEKAVKLKQKNLSTEIRENLSEIRQENDRLTLNQQLTRFSTHIAA
WLVSTGVAAACCIAVYYLAVYNSEFLKTHRNPGAVLLLPFVVSCINLAVPRFYSMFRLVE
RFEVPRQEVYVLLIRNILLKISIVGILCYYWLNIVALSDEECWETFIGQDIYRLLLMDFV
FSLADSLLGEFLRRLIGTKFITSLSLQEFDIARNVLELIYAQTLAWLGIFFCPLLPFIQM
ITLIIMFYVKNVSLMMNFQPPSKAWRASQMITFFIFLLFFPSFTGVLCTLAITIWRLKPS
PDCGPFRGLPSFIQSVYSWIDTLSKRSGYLWVVWIYQNLIGSVHFFFILTLIVLIITYLY
WQITEGRKIMIRLLHEQIINEGKDKMFLIEKLAKLQDMEKRANPSALILERREVEQHNPL
YLEDLSAAHDLRLRRSVQEENPEA
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctttcacgggaatagcagctacgagggccatgctgactaccctggctattca
aggtctcaaaaccgtacacagagctatttgaaaactcaggaccatctagacaatccaagc
ttccaccatcccaggagcaacccatattcttcgggctccagaacaaatccagactacccc
aagcctctagccgaagcagattatcctggatctccgagtagtgcagactatcgcaatgcc
agggatcctccattctctgtgcattccagaacaaggccagactatcacgagtctttaccg
gaaccagactataatgacttccggagcgatccctaccacacaggctcatccccggagcct
gactaccccgagtctcagtgccattctggttttgcgagagacagaagcagcaacaactat
gcagattccagagccaacctaggttatttggggtccttggaagaaccagactatcctgga
gctcagggcagctctgatcatcctggccccagggccagttccaacctgccaggctccaga
agagatgtcggtcatgctggctccagaatcaattcctacctagacacctttggggaacct
gattacccaggtgctgagaatcagccaaactcgccccacttttatggagaaccagactat
cctggtgctgagggctcaaagaatgcttcagacttttggggagaacctgattatccaggt
gctgaggaagatcatgtttatggctcttccaaagtcttcaggaggagtaatggccccttc
ggggtgctggggagagagaatgaagattctcctgaaggcattgagatggtacccatggag
atggcaggtcagcagggccactctctgccaggtgatcctagaaatggctatgtgaattct
gcttatgagagaggaagcagccctatctgtgcagatggaaacctgctgctatgtgagcgt
gactggcacatgtcaccccaaggacaaaaactaattgcatccctggttcccatgacatct
agggacagaatcaaaaccatcagaaaccagccaaggaccatggaagagaagagggagctt
agaaaaatagttgacaaagagaagagtaaacagcgccatggtgccctggagatcaactgc
tgtgctcagtgtctgagctccctatccctggcttaccgcagaaccaggagcaacctttca
gaactcctcgattatgtcagcttgtggcagaagacattcaaggtcatcggaggcaagttt
ggaaccagcgtcctgtcctatttcagcttcctgaggtggcttttgaagttcaacatcttc
tcatttgtcatgaacttcagcttcctcatcatcccgcagttcaccgtggccgagaggaac
acccgccacttcacggggttggagttcttcacaggggcgggctattttacggacacagtg
atgtactatggcttttacaccaactccacaattcagcatgggacgggtggaccatcttac
aacatgcagttggcctacatcttcaccatcggagcctgcctggtcatctgcttcttcagt
ctgctcttcagcatggccaagtacttccggaacaacttcatcaacccccatatttactcc
agagggatcgctaagcttgtcttctgctgggacttcactgtcacccatgaaaaagctgtg
aagctaaagcagaagaatctgagcacagagatcagggagaacctgtctgagatccgccag
gagaacgacaggctcacgctcaaccagcagctgacccgcttctccactcacatagccgcc
tggctcgtctctaccggagtggccgcagcctgctgtatagctgtgtactacttggctgtg
tataactctgagttcttgaagacgcacaggaaccccggggcggtgctgttactgccattt
gtcgtatcctgtatcaacctggcggtgcctcgcttctactccatgttccgcctagtggag
aggttcgaggtaccaaggcaggaagtctacgtcctcctcatccgaaacatccttctgaag
atctccatcgttggaattctttgttactattggctcaacatcgtggccctgtctgacgaa
gagtgctgggagaccttcattggccaggacatctaccggctccttctcatggacttcgtg
ttctcattggcggattccttactgggggagtttctgaggaggctcattgggacgaaattc
atcacaagtctcagcttacaggagtttgacattgccaggaatgttctagaactgatctac
gcacaaactttggcctggcttggaattttcttctgccctctgctgccgtttatccaaatg
atcactctcatcatcatgttctatgtcaaaaatgtcagcctgatgatgaacttccaacct
ccaagcaaggcctggcgggcctcacagatgataacgttcttcatcttcttgctcttcttt
ccgtccttcacgggagtgctgtgcaccctggccatcaccatctggagactgaaaccttcc
ccagactgtggccccttccgaggtctgccttccttcattcagtccgtctacagctggatc
gataccctaagcaaaaggtctggctacttgtgggtcgtctggatctaccagaacctcatc
ggaagtgtgcacttctttttcatcctcaccctcatcgtgctgatcatcacctatctttac
tggcagatcacagagggcaggaagatcatgatccggctgctccatgaacagatcattaac
gagggcaaagataagatgtttctgatagaaaagttggccaagctgcaggatatggagaag
agagccaaccccagtgcactgatcctggaaagaagagaggtggagcaacacaaccctttg
tatttggaggacctcagtgctgctcatgacctgcgattgaggcgatcagtgcaagaagag
aatccagaagcctga
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