Chionomys nivalis (European snow vole): 130879658
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Entry
130879658 CDS
T11437
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04120
Ubiquitin mediated proteolysis
cnl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130879658 (Syvn1)
04120 Ubiquitin mediated proteolysis
130879658 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnl04121
]
130879658 (Syvn1)
Enzymes [BR:
cnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130879658 (Syvn1)
Ubiquitin system [BR:
cnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130879658 (Syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
U-box_ZFPL1
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130879658
NCBI-ProteinID:
XP_057634373
LinkDB
All DBs
Position
8
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AA seq
610 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGAPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAVSRPGGTA
TTTTAGTSTSAPASGSAPGPEAAPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEEA
ASAVVSAAPSTSVPSSEAPSPGASSPAPEAEKPPAPELVGAAEELPEDGEPDAAELRRRR
LQKLESPVAH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgactggggcagtggtggct
catgcctactacctcaaacaccagttctatcccactgtggtgtatttgaccaagtccagc
cccagcatggcagtcctgtatatccaggcctttgtccttgtcttcctcttgggcaaagtg
atgggcaaagtgttctttgggcagctgagggcagccgagatggagcaccttctggagcgg
tcctggtacgctgtcaccgaaacctgtttggccttcactgtttttcgggatgacttcagt
cctcgtttcgtggcgctctttactctcctcctcttcctcaagtgtttccattggttggct
gaggaccgtgtggactttatggagcgcagccccaacatctcctggcttttccactgccgc
attgtctctcttatgttcctcctgggtatcttggacttcctcttcgtcagccacgcttat
catagcatcctcacccggggggcttctgtgcagctggtgtttggctttgagtatgccatt
ctgatgactatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccctgggacaataaggctgtatacatgctctacacggagctgttcacaggc
ttcatcaaagtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactctttgccattcggcccatgtacctggctatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtacccagatgccacc
cccgaggagctgcaggcaatggacaacgtctgcatcatctgccgagaggaaatggtgaca
ggcgctaagagactgccctgcaaccacatcttccatacaagctgcctgcgctcctggttc
cagaggcagcagacctgtcccacctgccgtatggatgtcctgcgggcatctttgccagcc
cagtccccgccaccccctgagcctgctgaccaaggagcaccccctgctcctcatcctcca
ccactgctgccacagcctcccaacttcccccagggcctcctgcctcctttcccgccaggc
atgttcccactgtggcccccaatgggtccctttccaccagtcccacctcccccaagctca
ggagaggctgcagctcctccgtccaccagtgcagctgtttctcggcccggtggaacagcc
accaccacaactgctggtaccagtacctctgccccagcatctggttctgcccctggccca
gaggctgcccctgcccctggcttccccttccctcctccttggatgggtatgcccctgccc
ccaccttttgccttccccccaatgcctgtgccccctgcgggctttgccggcctgacccca
gaggagctgcgggcgctggagggccatgaacggcagcacctggaggcccggctgcagagt
ctacgcaacatacacacgctactggatgctgccatgctgcaaatcaaccagtacctcact
gtgctggcctccttggggccccccaggccagctacttcagtcaaccccactgaagaggct
gcctctgcagtggtatctgctgccccctccaccagcgtccccagctctgaggccccatcc
cctggagcctcctcaccagcccctgaagctgagaagcctccggctcctgagttggtgggc
gctgcagaggagcttcctgaggacggagaacctgacgctgcagaactccgccggcgtcgc
ctgcaaaagctggagtcccctgttgcccactga
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