Chionomys nivalis (European snow vole): 130879689
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Entry
130879689 CDS
T11437
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04110
Cell cycle
cnl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130879689 (Smc3)
04114 Oocyte meiosis
130879689 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnl03036
]
130879689 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cnl00535
]
130879689 (Smc3)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130879689 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
130879689 (Smc3)
Proteoglycans [BR:
cnl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130879689 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130879689
NCBI-ProteinID:
XP_057634429
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All DBs
Position
8:complement(7483901..7524997)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGGQSQDEGEGSGESEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcagacgattgta
gatcccttcagctccaaacataacgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgttctcagtgatgaatttagtcatcttcgcccggagcag
cgattggctttgttacatgagggtacaggtcctcgtgttatttctgctttcgtggaaatc
atttttgacaattcagacaaccggttaccaatcgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcagtatttcctagacaagaagatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctgggttttctcgaagtaatccctactacattgttaaa
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattgaagctgttgaga
gaggtagctggtactagagtgtatgatgaacgtaaagaagaaagcatttctttaatgaaa
gaaacagagggtaaaagggaaaaaatcaatgagttgttaaaatacattgaagagcggttg
catactttagaggaggagaaggaagaactggctcagtatcagaagtgggataaaatgagg
cgtgccctggagtataccatctacaaccaggagctcaatgagacgcgggccaagcttgat
gagctttctgctaagcgagagacaagtggagagaaatctagacaattaagagatgcccag
caggatgcgagagataaaatggaggatattgaacgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagagcagcttagtgctgaaagacaggaacagattaaa
caaaggaccaagttggaacttaaagccaaggatttacaagatgagctggctggcaatagt
gaacagcggaaacgtttactaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagagacagaacctaaattcaacagcgttaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaggaaagaactgacctttatgcaaagcaaggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggagctgaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggataccgaggcaaataaagagaaaaatctggagcaatataataaactggatcaagat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagagcaa
caagcacttgctgctaagagagaagacctggaaaagaagcagcagcttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtgctagatcattttcgt
cgaaaaggaataaaccagcatgttcaaaatggctaccatggcatcgtaatgaataacttt
gagtgtgagccagctttctatacatgtgtggaagtcactgctggtaacaggttattttac
catattgttgattctgatgaagtcagcacgaagattttaatggagttcaataaaatgaat
cttcctggagaggtgacttttctgcctcttaacaagttagatgtgagagatactgcctat
cctgaaaccaatgacgctattcctatgatcagtaaactgaggtacaatccgaggtttgac
aaagctttcaaacatgtgtttgggaagacactcatctgtcggagcatggaagtttctact
cagctggcgcgtgctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgaggtgctctgactggaggctattatgatacaaggaagtctcgacttgagttacagaaa
gacgtcagaaaagcagaagaggagctgggtgaacttgaagcaaagctcaatgaaaacctg
cgcagaaacattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccaacaaaggaaatttaaagcttccagagatagcatattatcagagatgaag
atgctaaaagagaagaggcagcagtcagagaagacctttatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgccatggagtctaccagagaatcgctgaaagcagaa
ctaggaactgatttgctttctcaactcagtctagaagatcagaaaagagtagatgcactg
aatgatgaaatccgtcagcttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgtttg
gaccaagtagaacaggaacttaatgaattgagagagacagagggtggtactgttcttact
gccacaacatcagaacttgaagctatcaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgatactaaa
gagctggagaagatgaccaaccgccagggcatgctgctgaagaagaaagaggagtgcatg
aagaagatccgtgaactgggctcccttccccaggaagcgttcgagaagtaccagacgctg
agccttaagcagttgtttcgaaaacttgagcagtgcaacacagagttgaagaagtacagt
catgttaacaaaaaagctttagatcagtttgtgaatttctctgagcagaaggaaaagttg
ataaagcgacaagaagaattggataggggctacaaatccatcatggaactgatgaatgtg
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtttctaagaacttc
agtgaagtgttccagaagttggtacctggtggcaaagcgacgttggtgatgaagaaagga
gatgtagagggtggtcagtctcaggatgaaggggaaggcagcggggagagcgagaagggc
tctggctcacagagcagtgttccgtcagtcgaccagttcaccggagttggaatcagggtg
tcattcacaggaaagcaaggagaaatgagagaaatgcagcagctctcaggcggacagaag
tctctggtggcccttgctctgatttttgccattcagaaatgtgaccctgctcccttttac
ttgtttgatgaaattgaccaagcattggatgctcagcacagaaaagctgtgtcagatatg
atcatggagctggctgtgcacgcacagtttatcactaccacttttaggcctgaactgctg
gagtccgccgacaaattctatggtgtaaagttcagaaataaggtcagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagacgacaccacccatggttaa
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