KEGG   Chionomys nivalis (European snow vole): 130879708
Entry
130879708         CDS       T11437                                 
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    130879708 (Wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cnl03009]
    130879708 (Wdr43)
Ribosome biogenesis [BR:cnl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    130879708 (Wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Utp12 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 UTP15_C WD40_like Beta-prop_WDR35_TULP_N NBCH_WD40 Zip
Other DBs
NCBI-GeneID: 130879708
NCBI-ProteinID: XP_057634465
LinkDB
Position
1:complement(134560187..134601434)
AA seq 678 aa
MAAGGGGSCDPLAPAGVPCAFSPNGQAYFALASSDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEVIGTSDQVDLLALGTAVGSILLYSTVKGELHSKL
ISGGHENRVNCIQWHPENDCIYSCSDDKYIVEWSIQTCKVKCKWKGDNSSVNSLCISPDG
KMLLSAGRTIKLWALETKEVYRHFTGHSTPVSSLRFTTIRPNESQPFDGITGLYFLSGAV
HDRLLNVWQVRSENKERSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEH
ILNGHCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCLDKTSLLLVYGNWFQPTIER
LALNAKDTHICLERDISNCWAPTVETAITKVRTPVMNSEAKVLVPGIPGHHAPIKPPLSQ
PKEGENKRKLGRNEASIEERLGAMDLDRKGRKDDLLQTTSFPVLLTQGLESNDLEMLNKV
LQTRNINLIKKTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTIHASYLSTL
PDLVHQLGTLYQLMESRVKSFQKLSHLHGKLILLITQVTASEKMKKMPSPQQKAKLVYEE
ESSEEESDDEIAEKDSDDNWDEDEEKDSEKGEGVDEDNGEEDEDAEDVEESGEDRDVSSD
KELNGDSDLDPENESEEE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggccggtggcggtggtagctgcgaccccttggccccggcgggggtcccctgcgcc
ttctcgccgaacgggcaggcctacttcgctttagcctctagcgacggccacttgcgggtg
tgggagacagccaacaaccggctgcaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccagcgcggctgcaggccaaggaaagtcatcaaagg
aaaaaaaggaaatcggaagttataggaacgagtgaccaggttgacttattggctcttggt
acagcagttggtagcattttattgtatagtacggtaaaaggagaactgcacagtaaatta
ataagtggtgggcatgaaaacagagtcaattgcatacagtggcatccagaaaatgactgc
atatatagttgttcagatgataagtatattgtggagtggagtatacagacatgcaaagta
aagtgcaaatggaaaggagacaacagcagcgtcaattccctatgtatcagtccagatgga
aagatgttactttcggctggtcgaacaatcaaactgtgggctttggagaccaaagaagtt
tacagacacttcacaggccactcgacacctgtttcatcacttaggttcactaccatcaga
cctaatgaaagccagccttttgatgggattacaggtctctatttcttatctggagcagta
catgaccggttacttaatgtctggcaggtccgctcagaaaacaaagagagaagtgcggtt
atgtctttcacagtcacagatgaacctgtctatattgatttgactttgtcagagaacaag
gaagagcctgtcaagttagctgttgtttgcagagatggtcaagtccatctttttgaacac
atactaaatggacactgcaaaaagcctttgacttcaaattgcacaattcaaatagcaaca
cctgggaaaggcaagaaatcaacaccaaaacccatccctattctagcagctggattttgc
ttagataaaacgtccttattgcttgtgtatggcaattggtttcagcctaccattgagcga
ttggctttgaacgccaaagatactcatatatgtttggaaagagacatttccaattgctgg
gctccaacagtagaaacagcaataaccaaggtgagaacaccagtgatgaattctgaagca
aaagttctggtgcctgggattcctggacatcacgcaccgatcaagcctccactctcacag
cctaaggagggggagaacaagaggaaattaggcaggaatgaggctagcatcgaggagcgc
cttggagccatggatctagatagaaaaggaaggaaggatgaccttctgcagacaaccagc
tttccagtccttctcacccagggcttggaaagcaatgatttagagatgctaaataaagtg
cttcaaactagaaatataaatcttataaagaagactgtgctaaggatgcccttgcatgct
gttatcccattgttacaagagcttacgaagagattgcaaggacatcccaatagtgctgtg
ttaatggttcagtggctgaagtgtgtgctgacgattcatgcatcatacctgtccacgttg
cctgacctggtgcaccagctggggaccctctaccagctaatggaaagcagagtcaaatct
ttccagaaactctcacacctgcatggaaaactcattcttctcattacacaagttacagca
tcagaaaaaatgaaaaagatgccttcccctcaacagaaggcaaaattggtgtatgaagaa
gagtcttcagaagaggagtccgatgatgaaattgcagaaaaggattctgatgataattgg
gatgaagacgaagagaaagacagtgaaaaaggtgaaggtgttgatgaagacaatggagag
gaagatgaggatgctgaagatgtcgaagagagtggcgaggacagagatgtgtcaagtgat
aaagaattaaatggagattctgatctagatcctgaaaatgaaagtgaagaagagtga

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