Chionomys nivalis (European snow vole): 130881255
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Entry
130881255 CDS
T11437
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04136
Autophagy - other
cnl04140
Autophagy - animal
cnl04211
Longevity regulating pathway
cnl05010
Alzheimer disease
cnl05014
Amyotrophic lateral sclerosis
cnl05016
Huntington disease
cnl05017
Spinocerebellar ataxia
cnl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130881255 (Atg13)
04136 Autophagy - other
130881255 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
130881255 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
130881255 (Atg13)
05014 Amyotrophic lateral sclerosis
130881255 (Atg13)
05016 Huntington disease
130881255 (Atg13)
05017 Spinocerebellar ataxia
130881255 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
130881255 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130881255 (Atg13)
03029 Mitochondrial biogenesis [BR:
cnl03029
]
130881255 (Atg13)
Membrane trafficking [BR:
cnl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130881255 (Atg13)
Atg1 complex
130881255 (Atg13)
Mitochondrial biogenesis [BR:
cnl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130881255 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130881255
NCBI-ProteinID:
XP_057636699
LinkDB
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Position
9:82921231..82956201
Genome browser
AA seq
549 aa
AA seq
DB search
METDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPD
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTGEDAGVT
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHSQTPPPVLTDTLRVPMAGLAFSHQLSSSR
LSYQPAVLGLGSADLAYPVVFTAGLNTAHAHQLMVPGKEGGVPLAPSQPAHGTQADQERL
VTHTPSEGTHCAATPSSSEDTETVSNSSEGRASPHDVLETVFVRKVGAFVNKPINQVALT
SLDIPFAMFAPKNLELEDADPMVNPPDSPGTTSPLHGSLHSDGSSGGSSGNPHDDFVVLD
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVRE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcagttcccaggacagaaaggacctggacaagtttattaaatttttt
gcactcaagactgtccaagtaattgtccaggctcgacttggtgaaaagatttgcacccgt
tcatcttcttccccaacgggttctgattggttcaatttagcaatcaaagacatcccagat
gtcacccatgaagcaaagaaggccctgtcagggcagctgcctgcggtgggacgctctatg
tgtgtggagatctcactcaagacttctgagggagactccatggagttggaaatttggtgt
cttgaaatgaatgaaaagtgtgacaaagaaatcaaagtttcctacactgtatacaacaga
ctatcactgctgctgaagtctcttcttgctataacgagggtgacaccagcttacagactc
tcgagaaaacaagggcatgaatatgtaatattgtacaggatttattttggggaagttcaa
ctgaatggtttaggagaaggcttccagacagttcgagttggaacagtgggcacccctgtt
ggcaccatcactctttcctgtgcttatagaattaatttggcattcatgtcgaccaggcaa
tttgagaggaccccacctatcatggggattatcatagatcactttgttgaccgtccctac
cccagctcctctcccatgcacccttgcaattacagaactggtgaggatgctggagtcaca
tacccgtcagtggaagactctcaggaagtctgtaccacctctttttccacctcccctccc
tcccagtgtgtgtttactgtcacaaaggcacattctcagacccctcctcctgtgctgacg
gacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctctcgc
ctttcctatcagcctgctgtcctgggccttggatcggctgacctggcttatccagtagtg
tttactgctggcttaaacactgcacacgctcaccagctgatggttcctgggaaggaaggt
ggggtacctcttgctcccagccagcctgctcacggcacccaggctgaccaggagagactg
gtgactcacacaccttctgagggaacccactgtgctgccacgccatctagcagtgaggac
actgagactgtatctaacagcagtgagggacgggcctcaccccatgatgtcttggagact
gtctttgtccgaaaagtgggagcatttgtcaacaaacccatcaaccaggtggccctgaca
agtttggacatacccttcgccatgtttgctcccaagaatctggagctggaggatgctgat
cctatggtgaatccccccgattccccagggaccacgtctcctctccacggcagcctgcac
tcagatggctccagcgggggcagcagtggcaatccacacgacgactttgttgtgcttgac
tttaaacctgctttttctaaagatgacattcttccgatggacttggggaccttttaccgt
gaatttcagaatccccctcagctgagcagcctctccatagatattggagcccagtctatg
gcggaagacttggattctttaccagagaaactggctgtgcatgagaagaatgtccgagaa
tttgatgcctttgttgaaaccctgcagtaa
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