Chionomys nivalis (European snow vole): 130881663
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Entry
130881663 CDS
T11437
Symbol
Nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03013
Nucleocytoplasmic transport
cnl05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130881663 (Nup160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130881663 (Nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130881663 (Nup160)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130881663 (Nup160)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130881663 (Nup160)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130881663 (Nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
TPR_2
DUF3942
Motif
Other DBs
NCBI-GeneID:
130881663
NCBI-ProteinID:
XP_057637330
LinkDB
All DBs
Position
9:complement(83952203..84013304)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGSLERSFVELIGAERERPRHFREFTARVVGTASAAFGAVKYSESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCILLPSGVHVSETQNHVIIL
ILTNQTVHRLILPHPSRMYRSELVTESQMQSVFTDIGKVDFRDPCNYQLIPTVPGLSSNS
TTSAAWLSSDGEALFALPSAAGGIFVLKLPPYDIPGVASVVELKQSSVMQRLLTGWMPTA
IRGDQGPSDRALSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGIYMHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLVDFALTSTDIWALWHDAENQTIVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPR
EMYLRSLFTPGRFINAALSKALQIFCRGTERNLDLSWSELKKEITLAVENELQGSVTEYE
FSQDEFRTLQQEFWCKFYACCLQYQEALSHPLALHLNPLTNMVCLLKKGYLSFLAPSSLV
DHLYLLPDEHLLTEDETTISDDADVARDVICLIKCLRMIGESVTMDMAVLMETSCYNLQS
PEKAAEHILEDLITIDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEVEMEKGFDPA
QPLNVRMNLYQLCGSSAAGSIVCRGVYKIASTRFLICRDLLILQQLLTRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWASQCLATDVPVDTLESNLQHLSVLKLTDSGALMANK
LVSSPQTIMELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLNPWCQVNVGSCRFMLGRCYLVTGEVQKALECFCQAA
SEVGKEEFLDRLVSSEDGEVVSTPKLQYYTKVLSLLGVVGLPELIIQLATVAITETSDDW
KSQAILRTCIFKHHLDLGHNSQAYEALTQIPDSSSQMDCLRQLVVVLCERSQLQDLVAFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVSDRPGASPKRNHDGECTVAPSNRQ
IEILELEDLEKECSLARIRLTLARHDPSAIAIAGSSSAKEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYRVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIVLSQKILD
KLEDYQQKVDKATRDLLYRRDL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggatccctggaacggagcttcgtggagctgatcggagctgaacgcgaa
aggcccaggcactttcgtgaatttacagcccgcgtcgtcgggactgccagtgctgcgttt
ggagccgtgaaatacagcgagagcgcgggaggcttctattatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacttctggggatacattggagctg
gtggaggaatcactggacataaatttgttgaataatgcagttcgcctaaaattccaaaac
tgcatcctcttacccagtggggttcatgtctctgaaactcagaatcatgtgataatcttg
atattaaccaatcagacagtgcacaggttaattttaccacacccttcccgtatgtacaga
agtgagctggtaactgaaagtcagatgcagtcagtatttactgacattggaaaagttgat
ttcagagatccttgcaactatcagttaattccaacagtacctggactgtcctcaaattct
accacctctgcagcctggcttagcagtgatggggaggctctttttgctttaccatctgct
gctggtggcatctttgttcttaaactacctccttatgacatacctggggtagcatcagtt
gtggaactgaaacagagttcagtgatgcagcgattgctcacaggctggatgcccacagct
ataaggggtgaccaggggccttcagatcgtgccctcagtcttgctgttcactgtgttgaa
cacgatgctttcatttttgccctgtgtcaggatcataaactccggatgtggtcctataag
gaccaaatgtgcctcatggtagctgacatgctggaatatgtccctgtgaacaaagacctt
cgactcactgcaggaacgggacataaattacgacttgcatattcaccatccatggggctc
tacctaggaatatatatgcatgccccaaaacgaggacagttctgcgttttccagttggtg
agcactgagaataatcggtatagtttagatcacatttcttcactgttcacttctcaggaa
acactggtcgattttgccttaacctcaacggatatctgggccctgtggcatgatgctgag
aaccaaacaattgtcaaatatatcaactttgaacacaatgttgcaggtcagtggaatcca
gtttttatgcagcctctgccagaagaagaaattgtcatcagagatgaccaagaccccaga
gaaatgtatttgcggagcctttttacaccaggacgattcataaatgcagctttatctaaa
gctttacagattttctgcaggggaactgagagaaacttggatctttcatggagtgaactt
aaaaaagaaattactttagctgttgaaaatgagctccaaggaagtgtaacagaatatgaa
ttctcccaggatgaatttcgtactttgcaacaggaattctggtgcaagttctatgcctgc
tgtctccagtatcaggaagccctctctcaccctcttgctctacatttgaaccctctcaca
aacatggtgtgccttctgaagaaaggatacctgtctttccttgcgccatcttccttagta
gatcatttatatctcctgcctgatgagcaccttttgacagaggatgagacaaccatatcg
gatgatgcagatgtggctcgggatgtcatatgtcttataaaatgcctccggatgattgga
gagtcagttaccatggatatggcagttttgatggaaaccagttgttataacttacagtct
ccagaaaaggctgcagagcacattttggaagatttgatcactattgatgtagaaaatgtg
atggaagacatttgtagtaagctgcaagagatcagaaaccctgtccatgccattggactt
cttatacgggaaatggattatgagacagaagtagagatggaaaagggatttgatccagct
cagcctttgaatgttcgaatgaatctctaccagctctgtggtagtagcgcagcaggctct
attgtgtgcagaggtgtgtataaaattgccagcactcgtttcctgatctgccgagaccta
ttgatcttacagcagcttttaacaagactaggagatgcagtgatcttgggagctggtcag
ctttttcaggctcagcaagacttgctgcatcgcacagctcccctgctcttgtcctactac
ctcattaagtgggcaagtcagtgcttggcaactgatgttccagttgacacactggaatct
aatctgcaacatttgtcagtactgaaattaactgattctggtgccttaatggcaaataaa
ttagtgtctagtcctcagacaattatggagttattcttccaagaagttgcaagaaaacat
attatatctcatctcttctctcaaccaaaagcccctttgagtcaaactggattgaactgg
cctgaaatgattactgcaattaccagttatttgttgcagcttttgtggcctagcaatcct
ggctgtctctttctagaatgtttgatgggaaattgccagtatgtacagttgcaggattat
attcaactgttgaatccctggtgtcaagtcaatgttggatcctgtcgatttatgctggga
cggtgttacctggttacaggagaagtgcagaaggctctggaatgtttctgtcaggcagca
tctgaagtaggcaaagaagaattcttagatcgcttggtcagctcagaggatggggaggtt
gtgtcaactcccaagcttcagtattatactaaggttttaagtctactgggtgttgttgga
ttgcctgaactgattattcagctagctacggtagcaattactgaaaccagtgatgactgg
aaaagtcaggctattttaagaacatgcattttcaaacatcatttggacttaggtcacaat
agccaagcatatgaggccctaacccaaattcctgattccagcagtcagatggactgcttg
cgacaactggtggtggttctttgcgagcgctcccaattgcaggacctcgtggcatttccc
tatgtgaatctgcataatgaggttgtaggaataattgaatcacgtgctagagctgtggac
cttatgactcacaattactacgaacttctctatgcttttcacatctaccgccacaattac
cgaaaagctggtacagtgatgtttgaatatggtatgcgccttggcagagaagttcgaact
ctccggggactcgagaagcaaggcaactgttatctggctgctattaactgtttacgcctt
attcgtccagagtatgcatggatcgtacagccagcttctggggcagtgtctgatcgccct
ggcgcatctcccaagaggaatcatgatggcgagtgcacagttgccccaagcaatcgacaa
attgaaattctggaactggaagatctggaaaaagaatgttctttagctcgaattcgcctt
acgttggctcggcatgatccatcagcgattgccattgcaggaagttcatcagcgaaggag
atggtcactcttctggttcaggccggactctttgacactgccatatcactgtgtcagact
tttaagcttcccttaacaccagtctttgagggacttgcttttaaatgcatcaagttgcag
tttggaggagaagcagcacaagcagaagcctgggcctggctagcagccaatcagctgtct
tctgtcatcactacgaaggagtccagtgctacagatgaagcatggaggttattgtcaact
tacttggaaagatacagagtccagaataacttgtatcatcattgtgtgatcaacaagttg
ctgtctcatggagtccctctgcctaactggcttataaacagttacaagaaagtcgatgct
gctgagttgcttcgtctgtacctgaactatgaccttttagaagaagctgtcgatttggtc
tccgagtatgtggatgctgtattagggaaaggacaccagtactttggaattgagttcccg
ctgtctgcaacagccccaatggtatggctcccatactcctctattgatcagcttctccag
gctcttggagaaaacagtgccaacagtcacaacattgtcctgtcccagaaaattcttgac
aaactagaagactaccagcaaaaagttgacaaggcaacacgggatttattataccgtcgg
gacttgtga
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integrated database retrieval system
