KEGG   Chionomys nivalis (European snow vole): 130882071
Entry
130882071         CDS       T11437                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl04512  ECM-receptor interaction
cnl04514  Cell adhesion molecule (CAM) interaction
cnl04820  Cytoskeleton in muscle cells
cnl05205  Proteoglycans in cancer
cnl05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130882071 (Sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    130882071 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130882071 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    130882071 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    130882071 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cnl00535]
    130882071 (Sdc4)
Proteoglycans [BR:cnl00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   130882071 (Sdc4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 130882071
NCBI-ProteinID: XP_057637949
LinkDB
Position
9:14039533..14058197
AA seq 202 aa
MAPASLLALLLLLFGGFPAAPAESIRETEVIDPQDLLEGGYYSGDLPDDEDAGGLEQGSD
DFELSGSGDLDGTEETKTFPEGIQPLVPLHNHIPERAQPGIRVPSDTKELEENEVIPKRV
SPSEVGDDISNKVSMSSTAQDSNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgcctgctagcctgcttgcgctgctgctgctgctcttcggaggcttccccgccgcc
cccgccgagtcgattcgagagactgaagtcatagaccctcaggacctcctggaaggcggc
tactactctggagacctccctgacgatgaagatgctgggggcctcgagcagggatcagat
gactttgagctgtcgggctctggagatctggatggcaccgaggagaccaagaccttccca
gaagggatacaacccttggtgcctctacacaaccacattccggagagggcacagcctggg
atccgtgtcccctcagacaccaaggagctggaagaaaatgaagtcattcccaaaagggtc
tcgccctccgaagtgggcgatgatatatccaacaaagtgtccatgtccagcactgctcag
gacagcaacatttttgagagaaccgaggtcctggcagctctgattgtgggcggcgtggtg
ggcatcctcttcgccgtcttcctgatcctgctgctggtgtaccgcatgaagaagaaggac
gaaggcagttacgacctgggcaagaaacccatctacaaaaaagcccccaccaacgagttc
tatgcgtga

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