KEGG   Chionomys nivalis (European snow vole): 130882344
Entry
130882344         CDS       T11437                                 
Symbol
Actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl04510  Focal adhesion
cnl04517  IgSF CAM signaling
cnl04518  Integrin signaling
cnl04519  Cadherin signaling
cnl04520  Adherens junction
cnl04530  Tight junction
cnl04670  Leukocyte transendothelial migration
cnl04810  Regulation of actin cytoskeleton
cnl05146  Amoebiasis
cnl05203  Viral carcinogenesis
cnl05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130882344 (Actn1)
   04518 Integrin signaling
    130882344 (Actn1)
   04519 Cadherin signaling
    130882344 (Actn1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130882344 (Actn1)
   04520 Adherens junction
    130882344 (Actn1)
   04530 Tight junction
    130882344 (Actn1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    130882344 (Actn1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    130882344 (Actn1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    130882344 (Actn1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    130882344 (Actn1)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    130882344 (Actn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cnl04131]
    130882344 (Actn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cnl04812]
    130882344 (Actn1)
   04147 Exosome [BR:cnl04147]
    130882344 (Actn1)
Membrane trafficking [BR:cnl04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    130882344 (Actn1)
Cytoskeleton proteins [BR:cnl04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     130882344 (Actn1)
Exosome [BR:cnl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130882344 (Actn1)
  Exosomal proteins of colorectal cancer cells
   130882344 (Actn1)
  Exosomal proteins of bladder cancer cells
   130882344 (Actn1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI FUSC
Other DBs
NCBI-GeneID: 130882344
NCBI-ProteinID: XP_057638277
LinkDB
Position
10:44536756..44632936
AA seq 914 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKFLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDMLECDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITEDELRRELPPDQAEYCIARMAPYAGPDSVPGALD
YMSFSTALYGESDL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggaccattatgattcccagcagaccaacgactacatgcagcctgaagaggactgggac
cgggacctgcttctggatccggcctgggagaaacagcagaggaagacattcacagcctgg
tgcaactctcacctgcggaaggcggggacacagatcgagaacattgaggaggacttccgt
gacggcctgaagctcatgctgctcctggaggtcatctcaggcgaacgcttggccaagcca
gagagaggcaagatgcgagtgcacaagatctccaacgtcaacaaggccctggatttcata
gccagcaaaggagtcaagctggtgtccatcggggccgaagagattgtggatgggaatgtg
aagatgaccctgggcatgatctggaccatcatccttcgctttgccatccaggacatctct
gtggaagagacatcagctaaagaagggttactcctgtggtgtcagaggaagacagccccg
tataaaaatgtcaacatccagaacttccacatcagttggaaggatggccttggtttctgt
gccttgatccaccgacaccggcctgagttgatcgactatgggaagctgcggaaggacgat
ccactcacaaacctgaacacggcctttgatgtggcagagaagttcttggacatccctaag
atgctggatgctgaagatatcgtcggaactgcccggccggatgagaaagccattatgact
tatgtgtctagcttctaccatgccttttctggagcccagaaggcggaaacagcagccaac
cgcatctgcaaagttttggccgtcaatcaagagaatgaacagcttatggaagactacgag
aagctggccagtgatctgttggagtggatccgccgcaccatcccgtggctggagaatcgg
gtgcccgagaacaccatgcatgccatgcagcagaagctggaggacttccgagactaccgg
cgcctgcacaagccgcctaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaaactgcggctcagcaaccggcccgccttcatgccttccgagggcaggatg
gtctcggatatcaacaatgcctggggttgcctggagcaggcagagaagggctacgaggag
tggttgctgaatgagatccggaggctagagaggttggaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacagatggcaaagaagccatgctgcggcagaag
gattatgagacagccaccttgtcggagatcaaggccctgctcaagaaacacgaggctttt
gagagtgatctggctgcccaccaggaccgtgtggagcagatcgcagccatcgcccaggag
ctcaatgagctggactattatgactcacccagtgtcaacgctcgttgccaaaagatctgt
gaccagtgggacaatcttggggccctcactcagaagcggagggaagcgttagagagaaca
gagaagctgctggagaccatcgaccagctgtacttggaatatgccaagcgggctgcaccc
ttcaacaactggatggagggagccatggaggacctgcaggacaccttcattgtacatacc
attgaggagatccagggactgaccacagcccatgagcagttcaaggccaccctcccggat
gctgacaaagagcgcctggccatcctgggcattcacaatgaagtgtccaagattgtccag
acctatcatgtcaacatggcaggcaccaacccctatacaaccatcacgcctcaggagatc
aatggcaaatgggaccatgtacggcagctggtgccccggagggaccaggcactaacagag
gagcatgcccgccagcagcacaatgagaggctacgcaagcagtttggggcccaagccaat
gtcattgggccctggatccagaccaagatggaggagattgggaggatctccatcgagatg
cacggtaccctggaggaccagctcagccacctgcggcagtacgaaaagagcattgtcaac
tataagccaaagattgacatgctggagtgtgaccaccagcttatccaggaggcacttatc
ttcgataataagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctg
ctcaccaccattgccaggaccatcaatgaagtggagaaccagatcttgacccgggatgcc
aaaggcatcagccaggagcagatgaacgagttccgggcctccttcaaccactttgaccgg
gatcactccggcacgctgggtcctgaagagttcaaagcctgcctcatcagcttgggttat
gatattggcaacgacccccagaagaagacgggcatgatggacacagatgatttccgcgcc
tgccttatctccatgggttacaacatgggagaggcagaatttgcccgcatcatgagcatt
gtagaccccaaccgcttgggggtagtgacgttccaggccttcatcgacttcatgtcccga
gagacagctgacacggatacagcagatcaagtcatggcgtccttcaagatcctggctgga
gataagaattacatcacggaggacgagctgcgccgcgagctgccacctgaccaagccgaa
tactgcatcgcgagaatggccccatatgcaggcccagactctgtgcctggtgctctagac
tacatgtccttctccaccgcgctgtacggcgagagtgacctctaa

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